Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 RN7SKP227-201ENST00000364445 330 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 RNU6-487P-201ENST00000365430 104 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 RNU6-128P-201ENST00000383976 107 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 RNU6-1013P-201ENST00000384180 107 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 RNU6-843P-201ENST00000384454 104 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 RNU6-510P-201ENST00000391239 108 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 MIR450B-201ENST00000401182 78 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 RNU6-1245P-201ENST00000411130 106 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX56Q9NY93 HMGN2P31-201ENST00000432430 273 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX56Q9NY93 AL359672.1-201ENST00000442302 409 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 RPL22P13-201ENST00000493291 347 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX56Q9NY93 SNORA70.19-201ENST00000516717 90 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 RNU6-1314P-201ENST00000517139 104 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX56Q9NY93 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.69□□□□□ -1.82
DDX56Q9NY93 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.69□□□□□ -1.82
DDX56Q9NY93 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.69□□□□□ -1.82
DDX56Q9NY93 AL121579.1-201ENST00000555129 305 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.69□□□□□ -1.82
DDX56Q9NY93 MIR4697-201ENST00000582977 78 ntBASIC3.69□□□□□ -1.82
DDX56Q9NY93 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
DDX56Q9NY93 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.69□□□□□ -1.82
DDX56Q9NY93 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
DDX56Q9NY93 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
DDX56Q9NY93 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
DDX56Q9NY93 AC138915.1-201ENST00000565427 1685 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
DDX56Q9NY93 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
DDX56Q9NY93 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
DDX56Q9NY93 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
DDX56Q9NY93 Y_RNA.414-201ENST00000384011 101 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 U8.11-201ENST00000384699 133 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 U8.12-201ENST00000384701 133 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 MIR184-201ENST00000384962 84 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 AL445189.1-201ENST00000405722 338 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 Y_RNA.604-201ENST00000410574 102 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 RN7SKP263-201ENST00000411194 309 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 ATP5A1P2-201ENST00000412323 255 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 Z99755.1-201ENST00000414048 380 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX56Q9NY93 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.68□□□□□ -1.82
DDX56Q9NY93 AL513043.1-201ENST00000439124 535 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX56Q9NY93 AL031274.1-201ENST00000450334 232 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 U8.18-201ENST00000459285 133 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 SNORA20.3-201ENST00000516880 132 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.68□□□□□ -1.82
DDX56Q9NY93 TRMT10BP1-201ENST00000519377 943 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 BTF3P12-201ENST00000519620 469 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 GLYCAM1-201ENST00000546596 285 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 AC123912.5-201ENST00000605470 343 ntBASIC3.68□□□□□ -1.82
DDX56Q9NY93 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX56Q9NY93 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
DDX56Q9NY93 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
DDX56Q9NY93 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
DDX56Q9NY93 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.68□□□□□ -1.82
DDX56Q9NY93 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
DDX56Q9NY93 AC093908.1-201ENST00000623125 8092 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 SNORA72.1-201ENST00000363485 129 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 RNA5SP51-201ENST00000364750 119 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 AL513185.2-201ENST00000425543 193 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 SAR1AP4-201ENST00000429225 591 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 AC009296.1-201ENST00000443146 155 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 SNORD105B-201ENST00000458770 79 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 AC133134.1-201ENST00000466800 359 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 MTCYBP40-201ENST00000509390 1135 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 RN7SKP256-201ENST00000517201 314 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX56Q9NY93 AC011712.1-201ENST00000588959 234 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 RMST_8.1-201ENST00000610287 165 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 MIR6810-201ENST00000622701 70 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 AC138627.2-201ENST00000624202 601 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 AC068724.3-201ENST00000625906 87 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
DDX56Q9NY93 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.67□□□□□ -1.82
DDX56Q9NY93 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
DDX56Q9NY93 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
DDX56Q9NY93 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
DDX56Q9NY93 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX56Q9NY93 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
DDX56Q9NY93 SNORD9-201ENST00000362566 104 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 RNU6-254P-201ENST00000363377 107 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX56Q9NY93 SNORA32.2-201ENST00000384049 122 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 RNU6-55P-201ENST00000411092 107 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 RNU6-954P-201ENST00000411355 107 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 AC074117.2-201ENST00000417130 397 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX56Q9NY93 AP000907.1-201ENST00000428428 510 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 RPS15AP10-201ENST00000432472 382 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 MTND4LP16-201ENST00000440828 295 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 MTND3P10-201ENST00000450967 341 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 MTCO2P30-201ENST00000503662 364 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 AC010486.1-201ENST00000511793 424 ntBASIC3.66□□□□□ -1.82
DDX56Q9NY93 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.66□□□□□ -1.82
DDX56Q9NY93 AC025423.5-201ENST00000550230 219 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms