Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AL138825.1-201ENST00000618587 192 ntBASIC3.59□□□□□ -1.83
PARPBPQ9NWS1 FP236240.3-201ENST00000623061 327 ntBASIC3.59□□□□□ -1.83
PARPBPQ9NWS1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.59□□□□□ -1.83
PARPBPQ9NWS1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.59□□□□□ -1.84
PARPBPQ9NWS1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PARPBPQ9NWS1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PARPBPQ9NWS1 AC026951.1-201ENST00000559530 2459 ntBASIC3.59□□□□□ -1.84
PARPBPQ9NWS1 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-37P-201ENST00000362692 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-11P-201ENST00000364234 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-7-201ENST00000364784 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-8-201ENST00000365467 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-25P-201ENST00000383873 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-1-201ENST00000383898 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-1062P-201ENST00000383908 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-48P-201ENST00000384161 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-36P-201ENST00000384172 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-4P-201ENST00000384205 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-5P-201ENST00000384238 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-3P-201ENST00000384314 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-16P-201ENST00000384385 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-15P-201ENST00000384534 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-2-201ENST00000384627 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-29P-201ENST00000384637 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-9-201ENST00000384776 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-33P-201ENST00000384793 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 MIR625-201ENST00000385047 85 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 SNORA3C-201ENST00000408792 125 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU2-37P-201ENST00000410695 177 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 EI24P1-201ENST00000416584 867 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 AC078817.1-201ENST00000492623 435 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RPL7P47-201ENST00000497299 556 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 HMGN1P11-201ENST00000508668 303 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 SNORA40.15-201ENST00000516884 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 AP003733.2-201ENST00000529409 171 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 AMZ2P1-203ENST00000565833 850 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 MIR5701-3-201ENST00000578890 82 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 MIR5701-1-201ENST00000585138 82 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 AC006557.5-201ENST00000603126 811 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNA5SP108-201ENST00000605921 117 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 RNU6-6P-201ENST00000606623 107 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 MIR6867-201ENST00000610636 67 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 MIR5701-2-201ENST00000615634 82 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 ZYXP1-201ENST00000617638 118 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 U73479.1-201ENST00000618062 168 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 AC130454.1-201ENST00000622948 401 ntBASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PARPBPQ9NWS1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 SPRR2C-201ENST00000290702 219 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 RLIMP1-201ENST00000339626 1680 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 Y_RNA.471-201ENST00000384312 102 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 SNORA37-201ENST00000384504 129 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 MIR215-201ENST00000384858 110 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 AL592148.1-201ENST00000413568 445 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 AC091390.3-201ENST00000426478 338 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 RN7SL132P-201ENST00000478131 296 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 AL049874.1-201ENST00000489560 388 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 AC025554.1-201ENST00000505641 188 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 RNU6-927P-201ENST00000516199 100 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 RNU6-1315P-201ENST00000517187 99 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 IGKV2-23-201ENST00000518729 323 ntBASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PARPBPQ9NWS1 AC098826.3-201ENST00000603823 466 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms