Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.77□□□□□ -1.97
SIX2Q9NPC8 PIGFP3-201ENST00000441918 722 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AC104058.1-201ENST00000448028 297 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 RNU6-333P-201ENST00000459117 107 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AL160314.1-201ENST00000490836 438 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 RPL30P5-201ENST00000494923 336 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 RPS27P27-201ENST00000498779 255 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 MTCYBP18-201ENST00000501056 747 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AC097462.2-201ENST00000504623 481 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AL137161.1-201ENST00000532231 390 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 SYF2P1-201ENST00000550658 413 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 TRAV28-201ENST00000557548 323 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 MIR5583-1-201ENST00000580941 59 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AL138889.2-201ENST00000603883 242 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AL390240.1-201ENST00000612950 384 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 uc_338.34-201ENST00000617467 174 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 XIST_intron.1-201ENST00000619444 68 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AP003122.6-201ENST00000623831 495 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.77□□□□□ -1.97
SIX2Q9NPC8 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 AL079305.1-201ENST00000623159 3008 ntBASIC2.77□□□□□ -1.97
SIX2Q9NPC8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 MTND4P14-201ENST00000435799 1354 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 Y_RNA.157-201ENST00000363638 102 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 Y_RNA.231-201ENST00000364358 102 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 RNU6-876P-201ENST00000391295 104 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 AL356776.1-201ENST00000406574 447 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 RNA5SP111-201ENST00000411386 101 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 EEF1A1P40-201ENST00000412883 573 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 AL160275.3-201ENST00000423876 471 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 AL592045.1-201ENST00000429867 352 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 SNORD109B-201ENST00000458961 67 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 SNORD109A-201ENST00000459128 67 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 RPL37P6-201ENST00000460682 294 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 KC877373.1-201ENST00000479066 408 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 SUMO2P6-201ENST00000505273 288 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 AC018710.1-201ENST00000506509 158 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 TBCAP3-201ENST00000512475 312 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 RNU1-61P-201ENST00000516107 151 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 SNORA20.3-201ENST00000516880 132 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 RNA5SP291-201ENST00000517222 105 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 IGHV3-76-201ENST00000522465 295 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 CASP1P1-201ENST00000526345 212 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 EIF4BP1-201ENST00000554881 351 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 GTF3AP2-201ENST00000557014 266 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 ELOCP29-201ENST00000588193 334 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 BNIP3P9-201ENST00000603714 553 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 AL355073.2-201ENST00000612106 557 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 U6.42-201ENST00000618440 107 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SIX2Q9NPC8 HSPA8P4-201ENST00000511877 1920 ntBASIC2.76□□□□□ -1.97
SIX2Q9NPC8 AP001148.1-201ENST00000624124 2359 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 Y_RNA.245-201ENST00000364493 95 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 RNU4-66P-201ENST00000365199 138 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 RNU6-1127P-201ENST00000384580 107 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AL139039.1-201ENST00000401900 692 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AL592114.1-201ENST00000403842 483 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AL591704.1-201ENST00000432574 275 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 ERLEC1P1-201ENST00000433806 578 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 SETP5-201ENST00000437270 562 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 Z82210.1-201ENST00000440037 231 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC025750.2-201ENST00000442609 450 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.75□□□□□ -1.97
SIX2Q9NPC8 FABP5P15-201ENST00000453566 214 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 HMGN2P26-201ENST00000463169 339 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 RPS23P3-201ENST00000470993 430 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 TRBV1-201ENST00000476502 284 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 AC012181.1-201ENST00000479895 423 ntBASIC2.75□□□□□ -1.97
SIX2Q9NPC8 RPL21P99-201ENST00000480369 423 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms