Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 BNIP3P5-201ENST00000562290 498 ntBASIC4.94□□□□□ -1.62
NUCKS1Q9H1E3 AC010928.2-201ENST00000588017 287 ntBASIC4.94□□□□□ -1.62
NUCKS1Q9H1E3 AC067852.4-201ENST00000590314 478 ntBASIC4.94□□□□□ -1.62
NUCKS1Q9H1E3 BPIFA4P-203ENST00000603168 689 ntBASIC4.94□□□□□ -1.62
NUCKS1Q9H1E3 MIR7703-201ENST00000620784 77 ntBASIC4.94□□□□□ -1.62
NUCKS1Q9H1E3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.94□□□□□ -1.62
NUCKS1Q9H1E3 MIR4496-201ENST00000635896 61 ntBASIC4.94□□□□□ -1.62
NUCKS1Q9H1E3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NUCKS1Q9H1E3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NUCKS1Q9H1E3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
NUCKS1Q9H1E3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.94□□□□□ -1.62
NUCKS1Q9H1E3 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.94□□□□□ -1.62
NUCKS1Q9H1E3 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 AL590240.1-201ENST00000334118 313 ntBASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 RNU6-879P-201ENST00000364328 108 ntBASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 Y_RNA.262-201ENST00000364641 102 ntBASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 RNU4-9P-201ENST00000364951 139 ntBASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 SNORA46.1-201ENST00000391069 153 ntBASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 Y_RNA.597-201ENST00000410463 100 ntBASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 CYP4F29P-201ENST00000420685 446 ntBASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 AC008065.1-201ENST00000428525 348 ntBASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 AC008694.2-201ENST00000517591 306 ntBASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 AC008749.1-201ENST00000597650 306 ntBASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 RPL23AP88-201ENST00000605759 454 ntBASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 MIR7154-201ENST00000620673 73 ntBASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUCKS1Q9H1E3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 AL109809.4-201ENST00000603520 2185 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 ZNF137P-201ENST00000456718 1920 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 RNU6-1249P-201ENST00000363237 111 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 RNU6-843P-201ENST00000384454 104 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 AL022722.2-201ENST00000402519 180 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 MIR1250-201ENST00000408098 113 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 AL513331.1-201ENST00000411908 397 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 RPL23AP26-201ENST00000412728 464 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 RPS27P26-201ENST00000494583 239 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 AC146944.2-203ENST00000502493 354 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 AC139495.1-202ENST00000513164 354 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 SNORD116-25-201ENST00000516517 92 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 U3.53-201ENST00000628922 216 ntBASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUCKS1Q9H1E3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 Y_RNA.136-201ENST00000363444 102 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 SNORA71.2-201ENST00000364941 134 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 RNU1-63P-201ENST00000383902 164 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 RNU6-17P-201ENST00000384245 107 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 RNU6-18P-201ENST00000384527 107 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 SNORD12B-201ENST00000410433 91 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 AL590139.1-201ENST00000416267 400 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 AC024067.1-201ENST00000426199 223 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 TOMM20P4-201ENST00000427861 435 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 AP000907.1-201ENST00000428428 510 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 RPS27AP12-201ENST00000429552 465 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 AC011753.3-201ENST00000443436 406 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 MRPS10P1-201ENST00000448483 130 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 AC073264.2-201ENST00000448886 166 ntBASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUCKS1Q9H1E3 RPS29P22-201ENST00000472363 168 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms