Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC134698.4-201ENST00000523451 826 ntBASIC3.54□□□□□ -1.84
SNX27Q96L92 AP003122.3-201ENST00000526316 255 ntBASIC3.54□□□□□ -1.84
SNX27Q96L92 AC084851.1-201ENST00000529105 249 ntBASIC3.54□□□□□ -1.84
SNX27Q96L92 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.54□□□□□ -1.84
SNX27Q96L92 GTF3AP2-201ENST00000557014 266 ntBASIC3.54□□□□□ -1.84
SNX27Q96L92 AL157871.3-201ENST00000557231 293 ntBASIC3.54□□□□□ -1.84
SNX27Q96L92 HSPE1P7-201ENST00000604681 321 ntBASIC3.54□□□□□ -1.84
SNX27Q96L92 AL157817.1-201ENST00000614264 790 ntBASIC3.54□□□□□ -1.84
SNX27Q96L92 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.54□□□□□ -1.84
SNX27Q96L92 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNX27Q96L92 AC007256.1-201ENST00000392253 2765 ntBASIC3.54□□□□□ -1.84
SNX27Q96L92 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNX27Q96L92 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.54□□□□□ -1.84
SNX27Q96L92 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
SNX27Q96L92 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SNX27Q96L92 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX27Q96L92 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX27Q96L92 RNA5SP295-201ENST00000362655 121 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 RNU6-393P-201ENST00000384475 107 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 MIR514A2-201ENST00000385131 88 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 MIR514A3-201ENST00000385132 88 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 RNU6-332P-201ENST00000391193 108 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 FGF7P8-201ENST00000402994 292 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 RPL21P90-201ENST00000415692 466 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 RPL35AP12-201ENST00000425362 338 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 ERLEC1P1-201ENST00000433806 578 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 AL121601.2-201ENST00000438019 707 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 MTCO3P18-201ENST00000440206 761 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 AL353572.1-201ENST00000442490 417 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.53□□□□□ -1.84
SNX27Q96L92 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX27Q96L92 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.53□□□□□ -1.84
SNX27Q96L92 AC139453.3-201ENST00000493276 369 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.53□□□□□ -1.84
SNX27Q96L92 AC018710.1-201ENST00000506509 158 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 CCDC34P1-201ENST00000507441 517 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 AC074344.1-201ENST00000512823 224 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 AC104136.1-201ENST00000512969 394 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 NDUFB9P3-201ENST00000521269 501 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 TGIF1P1-201ENST00000558095 802 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.53□□□□□ -1.84
SNX27Q96L92 MIR5692A1-201ENST00000580523 69 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 MIR3609-201ENST00000582661 80 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 MIR548AC-201ENST00000585049 88 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 RNU6-89P-201ENST00000606519 100 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 FTX_3.1-201ENST00000610451 147 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 uc_338.1-201ENST00000612113 180 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 AC099506.2-201ENST00000623074 221 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 AC009033.1-201ENST00000624279 431 ntBASIC3.53□□□□□ -1.84
SNX27Q96L92 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNX27Q96L92 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX27Q96L92 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNX27Q96L92 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNX27Q96L92 Y_RNA.33-201ENST00000362591 102 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 RNU6-1035P-201ENST00000384477 107 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 MT-TL1-201ENST00000386347 75 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 RNU6-1025P-201ENST00000410629 104 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 BX276092.3-201ENST00000424182 230 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 AL669831.1-202ENST00000428504 417 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 AL353705.1-201ENST00000433468 480 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 GTF2IP13-201ENST00000438487 386 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX27Q96L92 MTND4P18-201ENST00000447010 465 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 AC109925.1-201ENST00000478069 331 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 AC006445.1-201ENST00000491925 405 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX27Q96L92 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX27Q96L92 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX27Q96L92 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.52□□□□□ -1.85
SNX27Q96L92 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX27Q96L92 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.52□□□□□ -1.85
SNX27Q96L92 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX27Q96L92 AL118558.2-201ENST00000556294 238 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 AMZ2P1-203ENST00000565833 850 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 MIR2682-201ENST00000580305 110 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.52□□□□□ -1.85
SNX27Q96L92 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.52□□□□□ -1.85
SNX27Q96L92 AC100810.6-201ENST00000638068 285 ntBASIC3.52□□□□□ -1.85
SNX27Q96L92 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNX27Q96L92 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNX27Q96L92 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.52□□□□□ -1.85
SNX27Q96L92 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX27Q96L92 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.51□□□□□ -1.85
SNX27Q96L92 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.51□□□□□ -1.85
SNX27Q96L92 MIR30E-201ENST00000362104 92 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 Y_RNA.86-201ENST00000363020 111 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 Y_RNA.88-201ENST00000363029 99 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 Y_RNA.157-201ENST00000363638 102 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 RNU6-805P-201ENST00000365643 106 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 RNU6-395P-201ENST00000365662 106 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.51□□□□□ -1.85
SNX27Q96L92 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNX27Q96L92 RNU6-434P-201ENST00000384376 107 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 RNU6-45P-201ENST00000384471 107 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 MIR578-201ENST00000384828 96 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SNX27Q96L92 SNORA16.2-201ENST00000390991 127 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 AL356776.1-201ENST00000406574 447 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 Y_RNA.615-201ENST00000410769 117 ntBASIC3.51□□□□□ -1.85
SNX27Q96L92 RNU4-47P-201ENST00000410876 114 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms