Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AC007938.3-201ENST00000604965 623 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 MIR7851-201ENST00000610611 160 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 AL157817.1-201ENST00000614264 790 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CTHRC1Q96CG8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.28□□□□□ -1.89
CTHRC1Q96CG8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 MTND4P27-201ENST00000450813 1354 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 AC002546.1-201ENST00000588041 2504 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 SNORD14B-201ENST00000364533 90 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 RNU6-384P-201ENST00000364900 104 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 AL591034.1-201ENST00000407447 340 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 RNU6-1304P-201ENST00000411374 106 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 RPL12P25-201ENST00000455592 494 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 AL135752.1-201ENST00000479477 471 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 AC026784.1-201ENST00000507986 352 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.708-201ENST00000516950 96 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 SYF2P1-201ENST00000550658 413 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 BNIP3P22-201ENST00000593399 556 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 ELOCP5-201ENST00000604924 333 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 AL627309.6-201ENST00000606857 840 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 AC019193.3-201ENST00000609144 554 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 AC134503.1-201ENST00000633048 54 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 AL356274.2-201ENST00000624379 3752 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 OTUD4P1-201ENST00000237841 3067 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 ZNF807-201ENST00000328088 1707 ntBASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CTHRC1Q96CG8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 MTND5P10-201ENST00000603719 1809 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-37P-201ENST00000362692 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.128-201ENST00000363391 112 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-11P-201ENST00000364234 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-7-201ENST00000364784 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-8-201ENST00000365467 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-25P-201ENST00000383873 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-1-201ENST00000383898 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 Y_RNA.394-201ENST00000383942 103 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-48P-201ENST00000384161 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-36P-201ENST00000384172 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-4P-201ENST00000384205 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-5P-201ENST00000384238 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-3P-201ENST00000384314 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-166P-201ENST00000384371 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-16P-201ENST00000384385 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-15P-201ENST00000384534 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-2-201ENST00000384627 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-29P-201ENST00000384637 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-9-201ENST00000384776 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU6-33P-201ENST00000384793 107 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 SNORD73A-201ENST00000386062 65 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 HMGN2P31-201ENST00000432430 273 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AL357552.1-201ENST00000445254 415 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RPL21P23-201ENST00000446654 460 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNU7-152P-201ENST00000458982 64 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 RNA5SP310-201ENST00000459084 116 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AC034236.1-201ENST00000469891 373 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AC005741.1-201ENST00000511094 432 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AC104576.1-201ENST00000524225 88 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AL163153.1-201ENST00000554223 283 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 HMGB1P14-201ENST00000557424 591 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 MIR3922-201ENST00000585192 84 ntBASIC3.26□□□□□ -1.89
CTHRC1Q96CG8 AC124303.1-201ENST00000605703 360 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 235.8 ms