Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 RNU2-1-201ENST00000618664 191 ntBASIC1.76□□□□□ -2.13
CPNE4Q96A23 U2.6-201ENST00000619225 191 ntBASIC1.76□□□□□ -2.13
CPNE4Q96A23 U2.5-201ENST00000619465 191 ntBASIC1.76□□□□□ -2.13
CPNE4Q96A23 U2.10-201ENST00000620268 191 ntBASIC1.76□□□□□ -2.13
CPNE4Q96A23 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.76□□□□□ -2.13
CPNE4Q96A23 RNA5SP160-201ENST00000364866 120 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 RPS20P2-201ENST00000402520 389 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 RNU6-1140P-201ENST00000410517 106 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 SNORD56-201ENST00000413522 71 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 ELOCP17-201ENST00000414751 326 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 RPS27AP14-201ENST00000422868 454 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 RAC1P6-201ENST00000423911 575 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.75□□□□□ -2.13
CPNE4Q96A23 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.75□□□□□ -2.13
CPNE4Q96A23 DNAJC19P4-201ENST00000440115 345 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.75□□□□□ -2.13
CPNE4Q96A23 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.75□□□□□ -2.13
CPNE4Q96A23 SNORD97-201ENST00000459187 142 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 snoU13.15-201ENST00000459407 104 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 snoU13.26-201ENST00000459452 105 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CPNE4Q96A23 UBL5P3-201ENST00000475112 231 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 YWHAEP4-201ENST00000505390 198 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.75□□□□□ -2.13
CPNE4Q96A23 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.75□□□□□ -2.13
CPNE4Q96A23 RNA5SP112-201ENST00000515937 99 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 MRPS36P3-201ENST00000519284 130 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 AC084851.1-201ENST00000529105 249 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.75□□□□□ -2.13
CPNE4Q96A23 AC002400.1-201ENST00000569310 726 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.75□□□□□ -2.13
CPNE4Q96A23 NRBF2P1-201ENST00000587407 859 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.75□□□□□ -2.13
CPNE4Q96A23 AL391813.2-201ENST00000609113 322 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.75□□□□□ -2.13
CPNE4Q96A23 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.75□□□□□ -2.13
CPNE4Q96A23 AL359854.1-201ENST00000614203 1594 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 AC009487.4-201ENST00000624969 3585 ntBASIC1.75□□□□□ -2.13
CPNE4Q96A23 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CPNE4Q96A23 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.74□□□□□ -2.13
CPNE4Q96A23 ADAM3A-203ENST00000461344 2157 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 RNU6-660P-201ENST00000364566 109 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 RNU6-701P-201ENST00000384059 107 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 RNU6-658P-201ENST00000384606 106 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AL356432.1-201ENST00000405809 419 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC096920.1-201ENST00000423991 241 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AL354941.1-201ENST00000438600 464 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AL161651.1-201ENST00000440882 223 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 BRK1P2-201ENST00000442875 223 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 NEFMP1-201ENST00000443423 1006 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 GDI2P2-201ENST00000445131 608 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 RPL23AP3-201ENST00000453844 468 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 RPL39P36-201ENST00000490784 156 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AP001372.4-201ENST00000524889 472 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC123904.2-201ENST00000548059 300 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 MIR5089-201ENST00000580047 84 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC005261.5-201ENST00000596280 355 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC073544.2-201ENST00000601155 540 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC007363.1-201ENST00000604736 620 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC144521.1-201ENST00000607148 956 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC027449.1-201ENST00000608890 407 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 uc_338.14-201ENST00000613162 166 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CPNE4Q96A23 AC007490.1-201ENST00000624321 703 ntBASIC1.74□□□□□ -2.13
CPNE4Q96A23 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.74□□□□□ -2.13
CPNE4Q96A23 AP006437.1-201ENST00000641440 3685 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CPNE4Q96A23 RNY3P13-201ENST00000365542 102 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 SMIM11P1-201ENST00000369586 178 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.73□□□□□ -2.13
CPNE4Q96A23 MIR147B-201ENST00000390185 80 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CPNE4Q96A23 RNU2-62P-201ENST00000410868 191 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.73□□□□□ -2.13
CPNE4Q96A23 EIF1AXP1-201ENST00000419267 435 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 AC098592.1-201ENST00000419352 333 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.73□□□□□ -2.13
CPNE4Q96A23 AC009238.1-201ENST00000442165 424 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 RPL23AP6-201ENST00000446637 472 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 AL606517.1-201ENST00000446914 387 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 AC009237.6-201ENST00000446969 424 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 RNU6-953P-201ENST00000459154 107 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 AC139453.3-201ENST00000493276 369 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 CKS1BP2-201ENST00000497342 240 ntBASIC1.73□□□□□ -2.13
CPNE4Q96A23 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.73□□□□□ -2.13
CPNE4Q96A23 MRPS33P3-201ENST00000513456 322 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms