Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 RNU6-1286P-201ENST00000383871 107 ntBASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 SNORA12.1-201ENST00000390873 148 ntBASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 AL592291.1-201ENST00000403830 352 ntBASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 CYCSP10-201ENST00000417973 294 ntBASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 BPY2DP-201ENST00000422208 265 ntBASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 AC010265.1-201ENST00000513509 211 ntBASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 AC090877.1-201ENST00000561418 344 ntBASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 AL360181.4-201ENST00000621752 134 ntBASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 AL353743.1-202ENST00000431724 1695 ntBASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 RNU1-83P-201ENST00000363426 164 ntBASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 RNU6-336P-201ENST00000364891 107 ntBASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 Y_RNA.495-201ENST00000384435 112 ntBASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 SNORD37.2-201ENST00000391075 66 ntBASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 NDUFB4P7-201ENST00000423198 363 ntBASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 MRPL48P1-201ENST00000445390 636 ntBASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 RNU2-56P-201ENST00000516826 190 ntBASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 SNORA31.22-201ENST00000517204 135 ntBASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 snoZ196.1-201ENST00000625269 89 ntBASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 AC018529.3-201ENST00000624212 2254 ntBASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
NKX2-3Q8TAU0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RNU1-94P-201ENST00000362627 173 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RNU5A-1-201ENST00000362698 116 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RNA5SP151-201ENST00000365632 117 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RNU6-32P-201ENST00000383948 107 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RNU6-13P-201ENST00000384248 107 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RNU6-12P-201ENST00000384604 107 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RNU6-541P-201ENST00000384709 110 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RNU6-41P-201ENST00000384741 107 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RNU6-460P-201ENST00000391158 108 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RNU6-1001P-201ENST00000411265 100 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 AL158823.1-201ENST00000418441 478 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 AIMP1P2-201ENST00000425294 312 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RPS12P10-201ENST00000427031 377 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 Y_RNA.637-201ENST00000459424 114 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RPS29P24-201ENST00000486345 171 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RPL31P61-201ENST00000496160 376 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 GMPSP1-201ENST00000514075 579 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 RNU1-6P-201ENST00000516290 144 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 AC009541.1-201ENST00000438279 2662 ntBASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
NKX2-3Q8TAU0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 AC104623.2-202ENST00000623477 4002 ntBASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 AC104260.2-201ENST00000623551 3497 ntBASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 AL450326.2-201ENST00000421913 1962 ntBASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 RNA5SP56-201ENST00000410277 118 ntBASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 RNU6-638P-201ENST00000516582 104 ntBASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 RN7SKP234-201ENST00000517173 224 ntBASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 HMGB1P14-201ENST00000557424 591 ntBASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 AC002545.1-201ENST00000592511 181 ntBASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 AC024153.1-201ENST00000603103 365 ntBASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 AC069294.1-201ENST00000608397 350 ntBASIC5.48□□□□□ -1.53
NKX2-3Q8TAU0 AC048347.1-201ENST00000624621 427 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms