Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CHPFQ8IZ52 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.66□□□□□ -1.82
CHPFQ8IZ52 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CHPFQ8IZ52 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
CHPFQ8IZ52 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.65□□□□□ -1.82
CHPFQ8IZ52 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CHPFQ8IZ52 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CHPFQ8IZ52 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 Y_RNA.167-201ENST00000363735 109 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 U3.12-201ENST00000364498 214 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 RNA5SP267-201ENST00000364893 126 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 RNU1-100P-201ENST00000365255 165 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 SNORA32.2-201ENST00000384049 122 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 RPL7P12-201ENST00000446719 750 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 RPL23AP14-201ENST00000468281 468 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 RN7SL601P-201ENST00000471221 293 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 AC083904.1-201ENST00000487828 231 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 AC026784.1-201ENST00000507986 352 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 SNORA19.2-201ENST00000516013 114 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 SNORA74D-201ENST00000516404 141 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 Y_RNA.687-201ENST00000516558 91 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 RNU6-1231P-201ENST00000517185 103 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 RPL7P20-201ENST00000520308 745 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 MIR3200-201ENST00000580767 85 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 AL442067.2-201ENST00000614033 363 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 AC104985.2-201ENST00000620598 500 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 Z69720.2-201ENST00000624755 279 ntBASIC3.65□□□□□ -1.83
CHPFQ8IZ52 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CHPFQ8IZ52 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHPFQ8IZ52 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CHPFQ8IZ52 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CHPFQ8IZ52 Y_RNA.530-201ENST00000384587 101 ntBASIC3.64□□□□□ -1.83
CHPFQ8IZ52 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CHPFQ8IZ52 MIR1289-1-201ENST00000408836 144 ntBASIC3.64□□□□□ -1.83
CHPFQ8IZ52 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.64□□□□□ -1.83
CHPFQ8IZ52 RPL35AP12-201ENST00000425362 338 ntBASIC3.64□□□□□ -1.83
CHPFQ8IZ52 AL358075.3-201ENST00000426289 226 ntBASIC3.64□□□□□ -1.83
CHPFQ8IZ52 AC243972.3-201ENST00000539655 198 ntBASIC3.64□□□□□ -1.83
CHPFQ8IZ52 AP000763.2-201ENST00000540641 163 ntBASIC3.64□□□□□ -1.83
CHPFQ8IZ52 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.64□□□□□ -1.83
CHPFQ8IZ52 BNIP3P25-201ENST00000596023 559 ntBASIC3.64□□□□□ -1.83
CHPFQ8IZ52 AC005261.5-201ENST00000596280 355 ntBASIC3.64□□□□□ -1.83
CHPFQ8IZ52 AC008121.1-201ENST00000603244 268 ntBASIC3.64□□□□□ -1.83
CHPFQ8IZ52 BRDTP1-201ENST00000605735 677 ntBASIC3.64□□□□□ -1.83
CHPFQ8IZ52 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.64□□□□□ -1.83
CHPFQ8IZ52 UCA1.1-201ENST00000620952 75 ntBASIC3.64□□□□□ -1.83
CHPFQ8IZ52 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.64□□□□□ -1.83
CHPFQ8IZ52 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.64□□□□□ -1.83
CHPFQ8IZ52 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.64□□□□□ -1.83
CHPFQ8IZ52 AC007496.3-201ENST00000624987 3443 ntBASIC3.64□□□□□ -1.83
CHPFQ8IZ52 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CHPFQ8IZ52 AC093908.1-201ENST00000623125 8092 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHPFQ8IZ52 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.63□□□□□ -1.83
CHPFQ8IZ52 RNU6-845P-201ENST00000362578 103 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 RNU6-797P-201ENST00000363101 109 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 RNU6-19P-201ENST00000384718 107 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AL096701.2-201ENST00000416920 238 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.63□□□□□ -1.83
CHPFQ8IZ52 USP9YP20-201ENST00000419224 558 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AC002075.2-201ENST00000425207 252 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.63□□□□□ -1.83
CHPFQ8IZ52 RBMY2UP-201ENST00000453474 324 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 MTND1P11-201ENST00000456661 876 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AC087884.1-201ENST00000469738 328 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AC025518.1-201ENST00000479856 347 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHPFQ8IZ52 RNU6-1069P-201ENST00000516612 133 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 BTF3P12-201ENST00000519620 469 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AC090136.1-201ENST00000520009 240 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 APOOP1-201ENST00000604695 592 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AL160281.1-201ENST00000605307 311 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AL136221.1-201ENST00000621449 509 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 U4.6-201ENST00000621618 127 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AP003355.3-201ENST00000623465 114 ntBASIC3.63□□□□□ -1.83
CHPFQ8IZ52 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHPFQ8IZ52 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CHPFQ8IZ52 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.63□□□□□ -1.83
CHPFQ8IZ52 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.63□□□□□ -1.83
CHPFQ8IZ52 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHPFQ8IZ52 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHPFQ8IZ52 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CHPFQ8IZ52 FAM35CP-201ENST00000554755 2470 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms