Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 AC025281.1-201ENST00000567026 265 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 MIR3941-201ENST00000582572 103 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 AC092954.2-201ENST00000609103 430 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 AC107294.3-201ENST00000609211 526 ntBASIC3.3□□□□□ -1.88
HERC6Q8IVU3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.3□□□□□ -1.88
HERC6Q8IVU3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 ASNSP3-201ENST00000451989 1306 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 MIR148B-201ENST00000362252 99 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 RNU6-434P-201ENST00000384376 107 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 MIR34A-201ENST00000385130 110 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 SAR1AP2-201ENST00000392696 594 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 MIR1261-201ENST00000408659 82 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 AL118520.1-201ENST00000450770 291 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 AC009902.1-201ENST00000519351 183 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 AC022634.1-201ENST00000520765 532 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 MTND4P7-201ENST00000523876 130 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 AL137161.1-201ENST00000532231 390 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 HIF1AP1-201ENST00000553642 175 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 AC138761.3-201ENST00000579993 334 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 Z82243.1-201ENST00000609432 473 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 MIR1321-201ENST00000637766 79 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 ADAM3A-203ENST00000461344 2157 ntBASIC3.29□□□□□ -1.88
HERC6Q8IVU3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
HERC6Q8IVU3 RNU6-371P-201ENST00000364283 108 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 Y_RNA.381-201ENST00000365666 102 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 RNU6-483P-201ENST00000384088 108 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 SNORA40C-201ENST00000391285 128 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HERC6Q8IVU3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.28□□□□□ -1.88
HERC6Q8IVU3 EIF1P1-201ENST00000421436 341 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 USP9YP18-201ENST00000425912 695 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 RPS15AP5-201ENST00000436276 388 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.28□□□□□ -1.88
HERC6Q8IVU3 NDUFB1P2-201ENST00000449477 176 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 AC117440.1-201ENST00000474107 571 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 RPS29P20-201ENST00000489592 171 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.28□□□□□ -1.88
HERC6Q8IVU3 AP005435.4-201ENST00000529514 284 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 AC109635.3-201ENST00000529536 185 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.28□□□□□ -1.88
HERC6Q8IVU3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.28□□□□□ -1.88
HERC6Q8IVU3 AC007938.3-201ENST00000604965 623 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 U6atac.1-201ENST00000616025 117 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 AC091903.1-201ENST00000624322 454 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.28□□□□□ -1.88
HERC6Q8IVU3 AC073476.4-201ENST00000628409 72 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HERC6Q8IVU3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.28□□□□□ -1.88
HERC6Q8IVU3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.28□□□□□ -1.88
HERC6Q8IVU3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
HERC6Q8IVU3 MAPK10-322ENST00000641485 4530 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 RNU4-12P-201ENST00000365233 139 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 RNU6-45P-201ENST00000384471 107 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 RNU6-393P-201ENST00000384475 107 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 CIR1P3-201ENST00000405137 479 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 EEF1A1P40-201ENST00000412883 573 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AL645937.1-202ENST00000421799 937 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AL365496.1-201ENST00000426885 215 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AL627311.1-201ENST00000431514 115 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 NIPA2P5-201ENST00000452282 464 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 BTF3P15-201ENST00000455606 336 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 SCARNA18-201ENST00000459004 134 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 RPL23AP11-201ENST00000475260 469 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AC112206.3-201ENST00000514578 389 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 RNA5SP401-201ENST00000515920 127 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.27□□□□□ -1.89
HERC6Q8IVU3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms