Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MIR3653-201ENST00000625572 110 ntBASIC4.93□□□□□ -1.62
TRIM50Q86XT4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TRIM50Q86XT4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.93□□□□□ -1.62
TRIM50Q86XT4 SCN1A-220ENST00000641603 12506 ntBASIC4.93□□□□□ -1.62
TRIM50Q86XT4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
TRIM50Q86XT4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 AL136964.1-201ENST00000622038 2990 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 AC118273.1-201ENST00000525324 3006 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 AL157777.2-201ENST00000258070 137 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 RNU4-90P-201ENST00000362773 141 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 Y_RNA.199-201ENST00000364014 102 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 RNA5SP151-201ENST00000365632 117 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 RNU6-318P-201ENST00000384283 103 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 AL033519.2-201ENST00000403958 392 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 EIF1AXP1-201ENST00000419267 435 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 HSPE1P25-201ENST00000455484 251 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 RPL7AP28-201ENST00000464513 571 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 AC087477.1-201ENST00000465747 340 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 AF186996.7-201ENST00000492781 209 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 Vault.1-201ENST00000516474 102 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 AP006245.1-201ENST00000522549 120 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 AC090281.1-201ENST00000523019 276 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 AP003730.1-201ENST00000524605 285 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 AC079587.1-201ENST00000603846 277 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 HAUS6P2-201ENST00000433254 2404 ntBASIC4.92□□□□□ -1.62
TRIM50Q86XT4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.92□□□□□ -1.62
TRIM50Q86XT4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 MIR383-201ENST00000362257 73 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 RNU1-94P-201ENST00000362627 173 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 RNU1-63P-201ENST00000383902 164 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 MIR518D-201ENST00000385014 87 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 MIR153-2-201ENST00000385225 87 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 RPS20P14-201ENST00000412545 360 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 EIF1P2-201ENST00000428233 350 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 NDUFB4P10-201ENST00000452541 359 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AC007224.1-201ENST00000564410 144 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AC091178.1-203ENST00000584586 279 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 FTX_3.1-201ENST00000610451 147 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 ZYXP1-201ENST00000617638 118 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AL023881.1-201ENST00000621088 301 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AC140479.6-201ENST00000633535 357 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AC018529.3-201ENST00000624212 2254 ntBASIC4.91□□□□□ -1.62
TRIM50Q86XT4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TRIM50Q86XT4 AC007390.2-201ENST00000606229 3803 ntBASIC4.9□□□□□ -1.62
TRIM50Q86XT4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM50Q86XT4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TRIM50Q86XT4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
TRIM50Q86XT4 RNU6-600P-201ENST00000362524 99 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 RNU6-942P-201ENST00000363002 107 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 SNORD115-32-201ENST00000364079 82 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.9□□□□□ -1.63
TRIM50Q86XT4 RNU6-1279P-201ENST00000383917 103 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 SNORD116-20-201ENST00000384529 92 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 MIR3065-201ENST00000390137 79 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
TRIM50Q86XT4 RNA5SP317-201ENST00000410176 116 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 RNA5SP311-201ENST00000411290 116 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 AC017079.2-201ENST00000416102 485 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 OR4C10P-201ENST00000434991 931 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 AL356535.1-201ENST00000440335 398 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 AC098831.1-201ENST00000440661 216 ntBASIC4.9□□□□□ -1.63
TRIM50Q86XT4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.9□□□□□ -1.63
TRIM50Q86XT4 BTF3L4P4-201ENST00000506381 449 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms