Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RNU6-1178P-201ENST00000516674 107 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.79□□□□□ -1.96
LDB1Q86U70 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.79□□□□□ -1.96
LDB1Q86U70 HPRT1P3-201ENST00000539521 576 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 AL121821.2-201ENST00000556081 394 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 AC020895.1-201ENST00000595362 272 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 AC007621.1-201ENST00000604544 437 ntBASIC2.79□□□□□ -1.96
LDB1Q86U70 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.79□□□□□ -1.96
LDB1Q86U70 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.79□□□□□ -1.96
LDB1Q86U70 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.79□□□□□ -1.96
LDB1Q86U70 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.79□□□□□ -1.96
LDB1Q86U70 CDC27P3-201ENST00000635418 1910 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 AC009487.2-201ENST00000420969 6821 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
LDB1Q86U70 RNU6-715P-201ENST00000365204 103 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 RNU6-898P-201ENST00000365627 104 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 SNORD21-201ENST00000383953 95 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 RNU6-45P-201ENST00000384471 107 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 MIR518D-201ENST00000385014 87 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
LDB1Q86U70 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.78□□□□□ -1.96
LDB1Q86U70 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.78□□□□□ -1.96
LDB1Q86U70 AL353621.1-201ENST00000418219 243 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.78□□□□□ -1.96
LDB1Q86U70 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.78□□□□□ -1.96
LDB1Q86U70 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.78□□□□□ -1.96
LDB1Q86U70 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.78□□□□□ -1.96
LDB1Q86U70 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.78□□□□□ -1.96
LDB1Q86U70 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.78□□□□□ -1.96
LDB1Q86U70 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.78□□□□□ -1.96
LDB1Q86U70 CACYBPP2-201ENST00000453625 678 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 Y_RNA.693-201ENST00000516641 110 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 SCARNA13-201ENST00000516672 275 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 AC016957.1-201ENST00000534895 309 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 AC107016.2-201ENST00000547968 190 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 AL512310.1-201ENST00000548639 172 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 HIF1AP1-201ENST00000553642 175 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.78□□□□□ -1.96
LDB1Q86U70 ZNF861P-201ENST00000588126 639 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 AC024153.1-201ENST00000603103 365 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 AC087045.1-201ENST00000605856 382 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 AC010338.1-201ENST00000621823 717 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 CR381653.2-201ENST00000624041 768 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 AC098679.4-201ENST00000624241 654 ntBASIC2.78□□□□□ -1.96
LDB1Q86U70 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.78□□□□□ -1.96
LDB1Q86U70 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
LDB1Q86U70 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.97
LDB1Q86U70 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LDB1Q86U70 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.77□□□□□ -1.97
LDB1Q86U70 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.77□□□□□ -1.97
LDB1Q86U70 SNORD14B-201ENST00000364533 90 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 RNU6-1215P-201ENST00000384441 102 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 MIR181A1-201ENST00000385026 110 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AL122016.1-201ENST00000403365 367 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LDB1Q86U70 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.77□□□□□ -1.97
LDB1Q86U70 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.77□□□□□ -1.97
LDB1Q86U70 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.77□□□□□ -1.97
LDB1Q86U70 AL161651.1-201ENST00000440882 223 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 OSTCP8-201ENST00000445117 448 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC233279.1-201ENST00000455300 423 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.77□□□□□ -1.97
LDB1Q86U70 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.77□□□□□ -1.97
LDB1Q86U70 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.77□□□□□ -1.97
LDB1Q86U70 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LDB1Q86U70 MRPS36P2-201ENST00000512569 299 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.77□□□□□ -1.97
LDB1Q86U70 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AL137161.1-201ENST00000532231 390 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AL512360.1-201ENST00000555346 234 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC092325.1-201ENST00000566449 554 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.77□□□□□ -1.97
LDB1Q86U70 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.77□□□□□ -1.97
LDB1Q86U70 AC005261.5-201ENST00000596280 355 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC073539.2-201ENST00000597113 165 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC010620.2-201ENST00000600135 313 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 BNIP3P30-201ENST00000601184 574 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.77□□□□□ -1.97
LDB1Q86U70 AC093732.2-201ENST00000607950 274 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC092954.2-201ENST00000609103 430 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC093788.1-201ENST00000609356 927 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC135507.2-201ENST00000612443 309 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC107871.2-201ENST00000612894 502 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.77□□□□□ -1.97
LDB1Q86U70 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LDB1Q86U70 AC004944.1-201ENST00000517807 3059 ntBASIC2.77□□□□□ -1.97
LDB1Q86U70 AC093536.2-201ENST00000565257 1406 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.76□□□□□ -1.97
LDB1Q86U70 RNU6-1280P-201ENST00000365211 107 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
LDB1Q86U70 SNORA69-201ENST00000383895 132 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 RNU6-434P-201ENST00000384376 107 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 RNU6-393P-201ENST00000384475 107 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 RNU6-851P-201ENST00000384565 107 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 RNU6-1127P-201ENST00000384580 107 ntBASIC2.76□□□□□ -1.97
LDB1Q86U70 MIR10A-201ENST00000385043 110 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms