Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 RNU6-730P-201ENST00000383954 104 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 RNU6-48P-201ENST00000384161 107 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AL360182.1-201ENST00000397433 468 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 PRRC2CP1-201ENST00000404428 159 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 RNU2-71P-201ENST00000411395 189 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AL136133.1-201ENST00000413694 376 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AL353777.1-201ENST00000425552 326 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 DDX3P2-201ENST00000446138 111 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 RNU7-180P-201ENST00000459240 63 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AC097493.1-201ENST00000463958 372 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AC109925.1-201ENST00000478069 331 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 SNORD116.3-201ENST00000517176 78 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AC012493.2-201ENST00000595083 291 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AP004247.3-201ENST00000608682 624 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 Z82243.1-201ENST00000609432 473 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AC121333.1-201ENST00000567488 2709 ntBASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.36□□□□□ -1.87
BHLHA9Q7RTU4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 SNORD3E-201ENST00000362899 217 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RNA5SP374-201ENST00000362939 125 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 Y_RNA.367-201ENST00000365544 101 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 SNORD116-11-201ENST00000383882 92 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RNU6-356P-201ENST00000384140 107 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RNU6-959P-201ENST00000384671 107 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 MIR525-201ENST00000384978 85 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RNU6-1168P-201ENST00000390831 104 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 EIF4E2P1-201ENST00000393781 255 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 AL121972.1-201ENST00000402023 252 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RNU6-121P-201ENST00000410525 99 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RNU4-47P-201ENST00000410876 114 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 AL138752.1-201ENST00000452964 351 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 SNRPGP5-201ENST00000456003 220 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 Y_RNA.644-201ENST00000459006 113 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 snoU13.7-201ENST00000459220 104 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RPS23P3-201ENST00000470993 430 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 AL049830.2-201ENST00000480072 201 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RNU6-1278P-201ENST00000516130 107 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 Y_RNA.674-201ENST00000516362 113 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RNA5SP384-201ENST00000516615 116 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RN7SKP277-201ENST00000516895 283 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 AC004024.1-201ENST00000549244 247 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 MIR4644-201ENST00000579929 84 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 MIR3200-201ENST00000580767 85 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 AC098848.2-201ENST00000588023 330 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 RNA5SP108-201ENST00000605921 117 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 uc_338.25-201ENST00000613756 156 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 AL365222.1-201ENST00000614661 98 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 MIR8057-201ENST00000620957 69 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 MIR4496-201ENST00000635896 61 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 AC046144.1-201ENST00000478559 1853 ntBASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
BHLHA9Q7RTU4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 RNU6-1339P-201ENST00000363574 91 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 RNU4-48P-201ENST00000365559 182 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 Y_RNA.428-201ENST00000384078 102 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 SNORA7.4-201ENST00000384249 137 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 U3.19-201ENST00000390893 196 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms