Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU5E-7P-201ENST00000365290 117 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 U3.22-201ENST00000391120 215 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 AL603910.2-201ENST00000407268 136 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 RNA5SP36-201ENST00000410197 133 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 RNU2-71P-201ENST00000411395 189 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 AC016397.1-201ENST00000412463 242 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 AL078601.1-201ENST00000444542 271 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 U8.22-201ENST00000459141 133 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 RPL31P61-201ENST00000496160 376 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.706-201ENST00000516933 99 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 AC104581.2-201ENST00000572227 430 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 AC140479.6-201ENST00000633535 357 ntBASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RNF111Q6ZNA4 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.143-201ENST00000363520 106 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 RNU6-280P-201ENST00000364145 104 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 RNA5SP509-201ENST00000364577 119 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.277-201ENST00000364754 102 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 SNORD115-46-201ENST00000390982 71 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 SNORA11F-201ENST00000408237 128 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 RPL17P36-201ENST00000420302 549 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 RPL18P10-201ENST00000425606 538 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 AL732292.1-201ENST00000426692 226 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 RPS29P17-201ENST00000430795 166 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 AL356535.1-201ENST00000440335 398 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 snoU13.24-201ENST00000458998 104 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 AC011276.1-201ENST00000469688 323 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 RNU7-175P-201ENST00000515915 61 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RNF111Q6ZNA4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.16-201ENST00000362421 102 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.150-201ENST00000363562 102 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 RNA5SP175-201ENST00000364275 119 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.274-201ENST00000364714 101 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.352-201ENST00000365439 102 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 RNU6-741P-201ENST00000383889 107 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.555-201ENST00000384673 110 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 RNU2-20P-201ENST00000410425 191 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 AP000275.1-201ENST00000411943 390 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 AL591043.1-201ENST00000432461 424 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 AC009220.1-201ENST00000451614 275 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 snoU13.4-201ENST00000458916 104 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 TOMM22P6-201ENST00000465035 409 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 RPL35AP15-201ENST00000468042 339 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 RNU5B-3P-201ENST00000516601 115 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 RNA5SP291-201ENST00000517222 105 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 CASP1P1-201ENST00000526345 212 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 AP002770.2-201ENST00000543613 532 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 RPL23AP78-201ENST00000599928 470 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 AL021997.2-201ENST00000615674 271 ntBASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RNF111Q6ZNA4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.29-201ENST00000362570 113 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.297-201ENST00000364950 91 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms