Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MIR1244-4-202ENST00000636813 85 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 DDX10P1-201ENST00000448545 1933 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 PRO1804-201ENST00000623780 2050 ntBASIC4.17□□□□□ -1.74
CNKSR3Q6P9H4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 Y_RNA.29-201ENST00000362570 113 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 SNORA7.2-201ENST00000364446 145 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-886P-201ENST00000384319 105 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 PCNPP3-201ENST00000393579 471 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 MIR548I2-201ENST00000408348 149 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 U3.42-201ENST00000408746 214 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-130P-201ENST00000411112 103 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AL030996.1-201ENST00000411430 235 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 ATP5A1P2-201ENST00000412323 255 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AC073063.1-201ENST00000434352 607 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 HMGB1P37-201ENST00000439613 609 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AC104332.1-201ENST00000440471 797 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AL353748.1-201ENST00000440753 474 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 RPL21P41-201ENST00000459863 264 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 RPL7P23-201ENST00000493874 747 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AC078918.1-201ENST00000498515 228 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AC026784.1-201ENST00000507986 352 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 RNU5B-3P-201ENST00000516601 115 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 RNU7-4P-201ENST00000516961 62 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AL034351.1-201ENST00000605288 668 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 RNU1-30P-201ENST00000606575 163 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.16□□□□□ -1.74
CNKSR3Q6P9H4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.74
CNKSR3Q6P9H4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.15□□□□□ -1.74
CNKSR3Q6P9H4 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
CNKSR3Q6P9H4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CNKSR3Q6P9H4 RNA5SP502-201ENST00000362694 119 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-280P-201ENST00000364145 104 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 Y_RNA.480-201ENST00000384364 102 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 Y_RNA.526-201ENST00000384572 110 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 UBE2D3P2-201ENST00000424409 445 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 MYL8P-204ENST00000431574 518 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 AC004383.1-201ENST00000438135 289 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 RPS26P28-201ENST00000470806 348 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 AC006517.1-201ENST00000480485 328 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 AC069499.1-201ENST00000489433 509 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 AC023141.12-201ENST00000512399 199 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 Y_RNA.687-201ENST00000516558 91 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 AC073410.2-201ENST00000603240 332 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 AC006023.2-201ENST00000609916 167 ntBASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CNKSR3Q6P9H4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 Y_RNA.84-201ENST00000363011 104 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-288P-201ENST00000363690 104 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 Y_RNA.270-201ENST00000364693 104 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-611P-201ENST00000384276 104 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 MIR135A2-201ENST00000384854 100 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 SNORA11.2-201ENST00000408318 127 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 MIR548H3-201ENST00000408771 118 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 RNU6-1203P-201ENST00000410703 110 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 RNU2-25P-201ENST00000411041 191 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 RPL21P90-201ENST00000415692 466 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 TOMM22P1-201ENST00000418578 312 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 SNORD105B-201ENST00000458770 79 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 MED28P2-201ENST00000475771 317 ntBASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.14□□□□□ -1.75
CNKSR3Q6P9H4 MLLT10P2-201ENST00000506434 249 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms