Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 UBL5P4-201ENST00000562584 236 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 AC007224.1-201ENST00000564410 144 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 DEFB117-201ENST00000602356 141 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 AC106754.2-201ENST00000623006 233 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 MIR6844-201ENST00000637122 62 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 OR56B2P-202ENST00000641377 2453 ntBASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CTC1Q2NKJ3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.15□□□□□ -1.58
CTC1Q2NKJ3 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.15□□□□□ -1.58
CTC1Q2NKJ3 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CTC1Q2NKJ3 AC018555.1-201ENST00000567548 1980 ntBASIC5.15□□□□□ -1.58
CTC1Q2NKJ3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CTC1Q2NKJ3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
CTC1Q2NKJ3 UBE2L2-201ENST00000254302 429 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 Y_RNA.33-201ENST00000362591 102 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 SNORA72.2-201ENST00000365028 127 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 RNU6-905P-201ENST00000384434 107 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 SNORA37-201ENST00000384504 129 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 U3.30-201ENST00000391308 210 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 HLFP1-201ENST00000402375 499 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 RNU6-588P-201ENST00000410281 105 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 RNU2-43P-201ENST00000410306 190 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 Y_RNA.595-201ENST00000410403 105 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 U8.19-201ENST00000459095 133 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 APOOP4-201ENST00000513530 597 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 AC008489.1-201ENST00000524271 483 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 MIR3121-201ENST00000579680 77 ntBASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CTC1Q2NKJ3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 AC009541.1-201ENST00000438279 2662 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 RNU6-1249P-201ENST00000363237 111 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 RNU6-1131P-201ENST00000364955 107 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 Y_RNA.558-201ENST00000384685 113 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 MIR10B-201ENST00000385011 110 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 MIR329-1-201ENST00000385028 80 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 RNU6-1025P-201ENST00000410629 104 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 Y_RNA.630-201ENST00000411370 108 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 PPP1R11P2-201ENST00000423543 382 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 AC090774.1-201ENST00000435925 246 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 RN7SL441P-201ENST00000492388 296 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 RNU6-143P-201ENST00000516942 93 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 FAM27B-201ENST00000610601 213 ntBASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CTC1Q2NKJ3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 ZNF720P1-201ENST00000562403 1939 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 SNORD115-32-201ENST00000364079 82 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 RNU6-336P-201ENST00000364891 107 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 RNU6-573P-201ENST00000383938 106 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 RNU6-281P-201ENST00000384212 103 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 SNORA70.10-201ENST00000384515 134 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 SSXP9-201ENST00000417503 292 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 AC124916.1-201ENST00000444020 547 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 snoU13.3-201ENST00000459441 104 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 AC011276.1-201ENST00000469688 323 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 AC109327.1-201ENST00000471666 403 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 RN7SL604P-201ENST00000492589 296 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 RNU6-377P-201ENST00000515965 102 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 RNU6-1007P-201ENST00000516586 107 ntBASIC5.13□□□□□ -1.59
CTC1Q2NKJ3 RNU2-60P-201ENST00000517290 128 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms