Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SRSF4Q08170 SNORA63.1-201ENST00000362493 131 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 Y_RNA.314-201ENST00000365114 102 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 Y_RNA.376-201ENST00000365638 108 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.28□□□□□ -1.88
SRSF4Q08170 RNU6-817P-201ENST00000391083 104 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 U3.42-201ENST00000408746 214 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 RNU6-1156P-201ENST00000410365 100 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 RNU6-712P-201ENST00000410558 100 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 RNU6-293P-201ENST00000411259 106 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 UBE2D3P2-201ENST00000424409 445 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.28□□□□□ -1.88
SRSF4Q08170 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 AC006011.1-201ENST00000442758 349 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.28□□□□□ -1.88
SRSF4Q08170 AC011005.2-201ENST00000487324 359 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 RPL17P19-201ENST00000489069 552 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.28□□□□□ -1.88
SRSF4Q08170 SNORA40.14-201ENST00000516543 86 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 RNU6-307P-201ENST00000516743 106 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 RN7SKP234-201ENST00000517173 224 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.28□□□□□ -1.88
SRSF4Q08170 AC040926.1-201ENST00000530195 238 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 CBX3P8-201ENST00000532412 525 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.28□□□□□ -1.88
SRSF4Q08170 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRSF4Q08170 MIR3944-201ENST00000581277 108 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 MIR3128-201ENST00000581957 66 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 RNU6-85P-201ENST00000605989 107 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.28□□□□□ -1.88
SRSF4Q08170 AL353748.2-201ENST00000622148 471 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.28□□□□□ -1.88
SRSF4Q08170 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRSF4Q08170 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.28□□□□□ -1.88
SRSF4Q08170 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SRSF4Q08170 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.28□□□□□ -1.88
SRSF4Q08170 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.28□□□□□ -1.88
SRSF4Q08170 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SRSF4Q08170 USP8P1-201ENST00000494673 3183 ntBASIC3.28□□□□□ -1.88
SRSF4Q08170 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SRSF4Q08170 ZNF285B-201ENST00000561698 1767 ntBASIC3.28□□□□□ -1.89
SRSF4Q08170 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SRSF4Q08170 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SRSF4Q08170 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
SRSF4Q08170 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.27□□□□□ -1.89
SRSF4Q08170 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SRSF4Q08170 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.27□□□□□ -1.89
SRSF4Q08170 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SRSF4Q08170 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SRSF4Q08170 Y_RNA.64-201ENST00000362845 102 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 Y_RNA.276-201ENST00000364732 109 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 RNU6-283P-201ENST00000364788 107 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 Y_RNA.288-201ENST00000364854 92 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
SRSF4Q08170 Y_RNA.480-201ENST00000384364 102 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 Y_RNA.562-201ENST00000384695 113 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 Y_RNA.577-201ENST00000384794 101 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 RNU6-607P-201ENST00000411283 108 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 AL030996.1-201ENST00000411430 235 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.27□□□□□ -1.89
SRSF4Q08170 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.27□□□□□ -1.89
SRSF4Q08170 AL133547.1-201ENST00000448546 220 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 AL031274.1-201ENST00000450334 232 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.27□□□□□ -1.89
SRSF4Q08170 RNA5SP246-201ENST00000458909 119 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 AC108860.1-201ENST00000484521 383 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 RPL29P14-201ENST00000495837 428 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 HMGB3P17-201ENST00000504195 649 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 SUMO2P6-201ENST00000505273 288 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.27□□□□□ -1.89
SRSF4Q08170 RNU6-914P-201ENST00000516749 109 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.27□□□□□ -1.89
SRSF4Q08170 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.27□□□□□ -1.89
SRSF4Q08170 AP000889.1-201ENST00000530968 660 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 SNRPGP16-201ENST00000533275 226 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 AC126177.3-201ENST00000551839 688 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 AC007375.1-201ENST00000554513 578 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.27□□□□□ -1.89
SRSF4Q08170 AC022655.2-201ENST00000577280 318 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 LRRC37A5P-203ENST00000580181 585 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 AC005255.1-201ENST00000593748 216 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 RAC1P9-201ENST00000604990 392 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 HMGN2P28-201ENST00000606102 262 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 AC012531.5-201ENST00000611375 151 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 SDR42E1P2-201ENST00000614861 481 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SRSF4Q08170 AC015967.1-201ENST00000619893 476 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 AL031601.2-202ENST00000622650 282 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 U6.98-201ENST00000637157 84 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.27□□□□□ -1.89
SRSF4Q08170 AC010733.2-201ENST00000589496 5702 ntBASIC3.27□□□□□ -1.89
SRSF4Q08170 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SRSF4Q08170 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SRSF4Q08170 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SRSF4Q08170 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SRSF4Q08170 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SRSF4Q08170 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SRSF4Q08170 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
SRSF4Q08170 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms