Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL162274.2-201ENST00000614406 332 ntBASIC3.08□□□□□ -1.92
LTBQ06643 SDR42E1P2-201ENST00000614861 481 ntBASIC3.08□□□□□ -1.92
LTBQ06643 AC244517.12-201ENST00000623581 663 ntBASIC3.08□□□□□ -1.92
LTBQ06643 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LTBQ06643 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LTBQ06643 AC004925.1-201ENST00000624256 2706 ntBASIC3.08□□□□□ -1.92
LTBQ06643 AF127577.6-201ENST00000623352 2191 ntBASIC3.08□□□□□ -1.92
LTBQ06643 AL356274.2-201ENST00000624379 3752 ntBASIC3.08□□□□□ -1.92
LTBQ06643 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
LTBQ06643 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
LTBQ06643 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
LTBQ06643 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.07□□□□□ -1.92
LTBQ06643 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LTBQ06643 RNU4-35P-201ENST00000362588 141 ntBASIC3.07□□□□□ -1.92
LTBQ06643 RNA5SP197-201ENST00000363357 119 ntBASIC3.07□□□□□ -1.92
LTBQ06643 RNU6-1188P-201ENST00000363795 107 ntBASIC3.07□□□□□ -1.92
LTBQ06643 Y_RNA.187-201ENST00000363918 113 ntBASIC3.07□□□□□ -1.92
LTBQ06643 Y_RNA.202-201ENST00000364083 110 ntBASIC3.07□□□□□ -1.92
LTBQ06643 Y_RNA.395-201ENST00000383945 109 ntBASIC3.07□□□□□ -1.92
LTBQ06643 Y_RNA.399-201ENST00000383955 105 ntBASIC3.07□□□□□ -1.92
LTBQ06643 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.07□□□□□ -1.92
LTBQ06643 RNA5SP31-201ENST00000411144 127 ntBASIC3.07□□□□□ -1.92
LTBQ06643 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LTBQ06643 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.07□□□□□ -1.92
LTBQ06643 AL159169.1-201ENST00000421119 127 ntBASIC3.07□□□□□ -1.92
LTBQ06643 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.07□□□□□ -1.92
LTBQ06643 MTCO3P10-201ENST00000455912 772 ntBASIC3.07□□□□□ -1.92
LTBQ06643 RNU7-167P-201ENST00000459160 62 ntBASIC3.07□□□□□ -1.92
LTBQ06643 AC104472.2-201ENST00000469035 601 ntBASIC3.07□□□□□ -1.92
LTBQ06643 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.07□□□□□ -1.92
LTBQ06643 AC117503.1-201ENST00000472241 394 ntBASIC3.07□□□□□ -1.92
LTBQ06643 AC090096.1-201ENST00000489168 390 ntBASIC3.07□□□□□ -1.92
LTBQ06643 AC008526.1-201ENST00000509149 338 ntBASIC3.07□□□□□ -1.92
LTBQ06643 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.07□□□□□ -1.92
LTBQ06643 RPL39P5-202ENST00000512505 151 ntBASIC3.07□□□□□ -1.92
LTBQ06643 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.07□□□□□ -1.92
LTBQ06643 SNORA31.3-201ENST00000516029 96 ntBASIC3.07□□□□□ -1.92
LTBQ06643 SNORA14.1-201ENST00000516113 141 ntBASIC3.07□□□□□ -1.92
LTBQ06643 RNU6-1069P-201ENST00000516612 133 ntBASIC3.07□□□□□ -1.92
LTBQ06643 RNU6-1213P-201ENST00000517075 94 ntBASIC3.07□□□□□ -1.92
LTBQ06643 RN7SKP258-201ENST00000517151 304 ntBASIC3.07□□□□□ -1.92
LTBQ06643 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.07□□□□□ -1.92
LTBQ06643 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.07□□□□□ -1.92
LTBQ06643 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.07□□□□□ -1.92
LTBQ06643 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.07□□□□□ -1.92
LTBQ06643 AC004024.1-201ENST00000549244 247 ntBASIC3.07□□□□□ -1.92
LTBQ06643 IMMP1LP2-201ENST00000552954 492 ntBASIC3.07□□□□□ -1.92
LTBQ06643 MTCO3P23-201ENST00000561363 289 ntBASIC3.07□□□□□ -1.92
LTBQ06643 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.07□□□□□ -1.92
LTBQ06643 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.07□□□□□ -1.92
LTBQ06643 U2.17-201ENST00000611454 95 ntBASIC3.07□□□□□ -1.92
LTBQ06643 AL359547.2-201ENST00000615810 418 ntBASIC3.07□□□□□ -1.92
LTBQ06643 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.07□□□□□ -1.92
LTBQ06643 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.07□□□□□ -1.92
LTBQ06643 MTND5P42-201ENST00000637720 498 ntBASIC3.07□□□□□ -1.92
LTBQ06643 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
LTBQ06643 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LTBQ06643 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LTBQ06643 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
LTBQ06643 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LTBQ06643 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
LTBQ06643 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LTBQ06643 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LTBQ06643 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
LTBQ06643 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LTBQ06643 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LTBQ06643 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LTBQ06643 ZNF807-201ENST00000328088 1707 ntBASIC3.06□□□□□ -1.92
LTBQ06643 Y_RNA.197-201ENST00000364004 102 ntBASIC3.06□□□□□ -1.92
LTBQ06643 RNU6-7-201ENST00000364784 107 ntBASIC3.06□□□□□ -1.92
LTBQ06643 SNORA33.2-201ENST00000365413 134 ntBASIC3.06□□□□□ -1.92
LTBQ06643 RNU6-8-201ENST00000365467 107 ntBASIC3.06□□□□□ -1.92
LTBQ06643 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LTBQ06643 RNU6-1074P-201ENST00000383995 104 ntBASIC3.06□□□□□ -1.92
LTBQ06643 Y_RNA.445-201ENST00000384168 102 ntBASIC3.06□□□□□ -1.92
LTBQ06643 SNORA36C-201ENST00000384289 132 ntBASIC3.06□□□□□ -1.92
LTBQ06643 RNU6-308P-201ENST00000390957 107 ntBASIC3.06□□□□□ -1.92
LTBQ06643 AL139397.2-201ENST00000404529 772 ntBASIC3.06□□□□□ -1.92
LTBQ06643 RPS4XP7-201ENST00000406274 780 ntBASIC3.06□□□□□ -1.92
LTBQ06643 AL031121.1-201ENST00000406553 254 ntBASIC3.06□□□□□ -1.92
LTBQ06643 RNU2-71P-201ENST00000411395 189 ntBASIC3.06□□□□□ -1.92
LTBQ06643 RPLP0P7-201ENST00000416050 667 ntBASIC3.06□□□□□ -1.92
LTBQ06643 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.06□□□□□ -1.92
LTBQ06643 AL356968.1-201ENST00000416622 474 ntBASIC3.06□□□□□ -1.92
LTBQ06643 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.06□□□□□ -1.92
LTBQ06643 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.06□□□□□ -1.92
LTBQ06643 RPL23AP82-202ENST00000427528 469 ntBASIC3.06□□□□□ -1.92
LTBQ06643 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.06□□□□□ -1.92
LTBQ06643 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.06□□□□□ -1.92
LTBQ06643 VDAC1P3-201ENST00000434069 851 ntBASIC3.06□□□□□ -1.92
LTBQ06643 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.06□□□□□ -1.92
LTBQ06643 AC008264.1-201ENST00000447612 367 ntBASIC3.06□□□□□ -1.92
LTBQ06643 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.06□□□□□ -1.92
LTBQ06643 CENPBD1P1-201ENST00000464061 469 ntBASIC3.06□□□□□ -1.92
LTBQ06643 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.06□□□□□ -1.92
LTBQ06643 KC877373.1-201ENST00000479066 408 ntBASIC3.06□□□□□ -1.92
LTBQ06643 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.06□□□□□ -1.92
LTBQ06643 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.06□□□□□ -1.92
LTBQ06643 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.06□□□□□ -1.92
LTBQ06643 AC005476.1-201ENST00000554427 397 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms