Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.09□□□□□ -2.23
CCL20P78556 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.09□□□□□ -2.23
CCL20P78556 AL136520.1-202ENST00000555494 763 ntBASIC1.09□□□□□ -2.23
CCL20P78556 AL160236.1-201ENST00000556317 195 ntBASIC1.09□□□□□ -2.23
CCL20P78556 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.09□□□□□ -2.23
CCL20P78556 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.09□□□□□ -2.23
CCL20P78556 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.09□□□□□ -2.23
CCL20P78556 Z82243.1-201ENST00000609432 473 ntBASIC1.09□□□□□ -2.23
CCL20P78556 AC093673.2-201ENST00000609674 331 ntBASIC1.09□□□□□ -2.23
CCL20P78556 AC103710.2-201ENST00000609912 942 ntBASIC1.09□□□□□ -2.23
CCL20P78556 AC006338.1-201ENST00000618453 749 ntBASIC1.09□□□□□ -2.23
CCL20P78556 AL158163.2-201ENST00000619110 700 ntBASIC1.09□□□□□ -2.23
CCL20P78556 AC091965.5-201ENST00000624785 342 ntBASIC1.09□□□□□ -2.23
CCL20P78556 MTND5P33-201ENST00000571250 1450 ntBASIC1.09□□□□□ -2.24
CCL20P78556 RBBP8P1-201ENST00000449447 1844 ntBASIC1.08□□□□□ -2.24
CCL20P78556 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CCL20P78556 U8.1-201ENST00000362843 134 ntBASIC1.08□□□□□ -2.24
CCL20P78556 RNU6-1284P-201ENST00000363701 100 ntBASIC1.08□□□□□ -2.24
CCL20P78556 RNU6-1164P-201ENST00000364428 107 ntBASIC1.08□□□□□ -2.24
CCL20P78556 RNU6-701P-201ENST00000384059 107 ntBASIC1.08□□□□□ -2.24
CCL20P78556 RNU6-14P-201ENST00000384630 106 ntBASIC1.08□□□□□ -2.24
CCL20P78556 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.08□□□□□ -2.24
CCL20P78556 RNU2-41P-201ENST00000410991 178 ntBASIC1.08□□□□□ -2.24
CCL20P78556 AL359704.1-201ENST00000411586 781 ntBASIC1.08□□□□□ -2.24
CCL20P78556 AL022400.1-201ENST00000423946 935 ntBASIC1.08□□□□□ -2.24
CCL20P78556 AC015922.2-201ENST00000435593 184 ntBASIC1.08□□□□□ -2.24
CCL20P78556 SNRPGP13-201ENST00000442212 177 ntBASIC1.08□□□□□ -2.24
CCL20P78556 AL078601.1-201ENST00000444542 271 ntBASIC1.08□□□□□ -2.24
CCL20P78556 MTCO2P25-201ENST00000447065 681 ntBASIC1.08□□□□□ -2.24
CCL20P78556 AC017099.1-201ENST00000448261 1028 ntBASIC1.08□□□□□ -2.24
CCL20P78556 RPS3AP22-201ENST00000488297 769 ntBASIC1.08□□□□□ -2.24
CCL20P78556 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CCL20P78556 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.08□□□□□ -2.24
CCL20P78556 AC008837.2-201ENST00000513076 418 ntBASIC1.08□□□□□ -2.24
CCL20P78556 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.08□□□□□ -2.24
CCL20P78556 AP004247.1-201ENST00000531556 1289 ntBASIC1.08□□□□□ -2.24
CCL20P78556 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.08□□□□□ -2.24
CCL20P78556 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.08□□□□□ -2.24
CCL20P78556 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.08□□□□□ -2.24
CCL20P78556 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.08□□□□□ -2.24
CCL20P78556 MTATP6P2-201ENST00000603319 678 ntBASIC1.08□□□□□ -2.24
CCL20P78556 AC116312.1-201ENST00000606841 314 ntBASIC1.08□□□□□ -2.24
CCL20P78556 AL022345.1-201ENST00000607292 135 ntBASIC1.08□□□□□ -2.24
CCL20P78556 AL050343.2-201ENST00000607338 280 ntBASIC1.08□□□□□ -2.24
CCL20P78556 MIR7843-201ENST00000622274 79 ntBASIC1.08□□□□□ -2.24
CCL20P78556 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.08□□□□□ -2.24
CCL20P78556 AL512643.1-201ENST00000635735 524 ntBASIC1.08□□□□□ -2.24
CCL20P78556 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.08□□□□□ -2.24
CCL20P78556 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.08□□□□□ -2.24
CCL20P78556 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.07□□□□□ -2.24
CCL20P78556 RNU1-58P-201ENST00000362413 163 ntBASIC1.07□□□□□ -2.24
CCL20P78556 RNU6-253P-201ENST00000384730 105 ntBASIC1.07□□□□□ -2.24
CCL20P78556 SNORA3.2-201ENST00000408221 125 ntBASIC1.07□□□□□ -2.24
CCL20P78556 RN7SKP284-201ENST00000411002 343 ntBASIC1.07□□□□□ -2.24
CCL20P78556 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.07□□□□□ -2.24
CCL20P78556 RAC1P6-201ENST00000423911 575 ntBASIC1.07□□□□□ -2.24
CCL20P78556 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.07□□□□□ -2.24
CCL20P78556 AC118469.1-201ENST00000442943 488 ntBASIC1.07□□□□□ -2.24
CCL20P78556 NEFMP1-201ENST00000443423 1006 ntBASIC1.07□□□□□ -2.24
CCL20P78556 AC104058.1-201ENST00000448028 297 ntBASIC1.07□□□□□ -2.24
CCL20P78556 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.07□□□□□ -2.24
CCL20P78556 RPS29P29-201ENST00000456396 171 ntBASIC1.07□□□□□ -2.24
CCL20P78556 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.07□□□□□ -2.24
CCL20P78556 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.07□□□□□ -2.24
CCL20P78556 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.07□□□□□ -2.24
CCL20P78556 AC113347.3-201ENST00000509113 148 ntBASIC1.07□□□□□ -2.24
CCL20P78556 AC087276.1-201ENST00000529659 480 ntBASIC1.07□□□□□ -2.24
CCL20P78556 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.07□□□□□ -2.24
CCL20P78556 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.07□□□□□ -2.24
CCL20P78556 AC008269.2-201ENST00000561915 1105 ntBASIC1.07□□□□□ -2.24
CCL20P78556 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.07□□□□□ -2.24
CCL20P78556 AP001485.1-201ENST00000604799 199 ntBASIC1.07□□□□□ -2.24
CCL20P78556 AL132822.1-201ENST00000617063 513 ntBASIC1.07□□□□□ -2.24
CCL20P78556 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.07□□□□□ -2.24
CCL20P78556 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.07□□□□□ -2.24
CCL20P78556 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.07□□□□□ -2.24
CCL20P78556 AL161722.3-201ENST00000605789 2983 ntBASIC1.07□□□□□ -2.24
CCL20P78556 ZNF680P1-201ENST00000436625 1469 ntBASIC1.06□□□□□ -2.24
CCL20P78556 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CCL20P78556 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CCL20P78556 RNU6-1010P-201ENST00000362757 107 ntBASIC1.06□□□□□ -2.24
CCL20P78556 MIR150-201ENST00000385048 84 ntBASIC1.06□□□□□ -2.24
CCL20P78556 MIR504-201ENST00000385065 83 ntBASIC1.06□□□□□ -2.24
CCL20P78556 RNU6-817P-201ENST00000391083 104 ntBASIC1.06□□□□□ -2.24
CCL20P78556 SNORA40C-201ENST00000391285 128 ntBASIC1.06□□□□□ -2.24
CCL20P78556 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.06□□□□□ -2.24
CCL20P78556 MIR320C1-201ENST00000408566 88 ntBASIC1.06□□□□□ -2.24
CCL20P78556 RN7SKP192-201ENST00000411291 327 ntBASIC1.06□□□□□ -2.24
CCL20P78556 SRIP3-201ENST00000413200 219 ntBASIC1.06□□□□□ -2.24
CCL20P78556 AC083875.1-201ENST00000419509 405 ntBASIC1.06□□□□□ -2.24
CCL20P78556 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.06□□□□□ -2.24
CCL20P78556 AC013262.1-201ENST00000426710 252 ntBASIC1.06□□□□□ -2.24
CCL20P78556 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.06□□□□□ -2.24
CCL20P78556 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.06□□□□□ -2.24
CCL20P78556 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.06□□□□□ -2.24
CCL20P78556 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
CCL20P78556 ZNF886P-201ENST00000450781 723 ntBASIC1.06□□□□□ -2.24
CCL20P78556 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.06□□□□□ -2.24
CCL20P78556 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.06□□□□□ -2.24
CCL20P78556 NDUFAF4P3-201ENST00000456468 525 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms