Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MIR301A-201ENST00000385261 86 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 SNORD73A-201ENST00000386062 65 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HERVK_113P62684 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.06□□□□□ -1.76
HERVK_113P62684 RPL23AP50-201ENST00000434149 455 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 snoU13.4-201ENST00000458916 104 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 RNU7-187P-201ENST00000458985 68 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 AC021146.2-201ENST00000504736 556 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.06□□□□□ -1.76
HERVK_113P62684 Y_RNA.720-201ENST00000517166 92 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 IGKV2-26-201ENST00000518305 343 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 AC009902.1-201ENST00000519351 183 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.06□□□□□ -1.76
HERVK_113P62684 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.06□□□□□ -1.76
HERVK_113P62684 OR1M4P-201ENST00000589199 287 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 AC007938.3-201ENST00000604965 623 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 AL713922.2-201ENST00000619384 716 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 SNORD39.4-201ENST00000620099 78 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 AL078596.1-201ENST00000624856 447 ntBASIC4.06□□□□□ -1.76
HERVK_113P62684 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.06□□□□□ -1.76
HERVK_113P62684 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
HERVK_113P62684 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
HERVK_113P62684 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HERVK_113P62684 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HERVK_113P62684 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERVK_113P62684 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.05□□□□□ -1.76
HERVK_113P62684 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HERVK_113P62684 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.05□□□□□ -1.76
HERVK_113P62684 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERVK_113P62684 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERVK_113P62684 MTND5P30-201ENST00000452896 1731 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 RNU6-1059P-201ENST00000363752 98 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 RNU6-331P-201ENST00000384724 107 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 SNORA75.6-201ENST00000391318 127 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 RN7SKP53-201ENST00000411337 315 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 UBE2V1P4-201ENST00000425374 344 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.05□□□□□ -1.76
HERVK_113P62684 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.05□□□□□ -1.76
HERVK_113P62684 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.05□□□□□ -1.76
HERVK_113P62684 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.05□□□□□ -1.76
HERVK_113P62684 MTND5P22-201ENST00000458380 195 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 AC018437.1-201ENST00000492214 406 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 HMGB1P22-201ENST00000505315 124 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 AC005921.1-201ENST00000510589 286 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 AL359273.1-201ENST00000510918 627 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 AC008716.1-201ENST00000511084 513 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 AC023141.12-201ENST00000512399 199 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 RNU6-1256P-201ENST00000516539 103 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 RNU6-1137P-201ENST00000517073 99 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 RNU6-1315P-201ENST00000517187 99 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.05□□□□□ -1.76
HERVK_113P62684 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.05□□□□□ -1.76
HERVK_113P62684 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.05□□□□□ -1.76
HERVK_113P62684 MIR4738-201ENST00000579134 87 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 AL161798.1-201ENST00000604630 131 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 AP002826.1-201ENST00000608835 315 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 AC006157.1-201ENST00000611750 366 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 AC004825.2-201ENST00000616634 455 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 PLCE1P1-201ENST00000622094 305 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.05□□□□□ -1.76
HERVK_113P62684 AC007656.2-201ENST00000624902 4547 ntBASIC4.05□□□□□ -1.76
HERVK_113P62684 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERVK_113P62684 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERVK_113P62684 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERVK_113P62684 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HERVK_113P62684 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HERVK_113P62684 Y_RNA.151-201ENST00000363566 112 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 RNU6-1329P-201ENST00000365664 107 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 AC117470.1-201ENST00000381974 330 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 Y_RNA.463-201ENST00000384271 102 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 AL445529.1-201ENST00000398713 389 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HERVK_113P62684 MCFD2P1-201ENST00000417812 300 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 RPS15AP6-201ENST00000420703 385 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.04□□□□□ -1.76
HERVK_113P62684 AC007919.1-201ENST00000429380 217 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 RPS24P6-201ENST00000452670 400 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.04□□□□□ -1.76
HERVK_113P62684 SCARNA16.2-201ENST00000516520 172 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
HERVK_113P62684 AP004242.1-201ENST00000533701 349 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 AL157871.3-201ENST00000557231 293 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 MIR1273C-201ENST00000578669 77 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 AC005014.2-201ENST00000607795 599 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.04□□□□□ -1.76
HERVK_113P62684 AC007485.1-201ENST00000616755 206 ntBASIC4.04□□□□□ -1.76
HERVK_113P62684 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HERVK_113P62684 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HERVK_113P62684 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HERVK_113P62684 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HERVK_113P62684 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HERVK_113P62684 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HERVK_113P62684 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HERVK_113P62684 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HERVK_113P62684 Y_RNA.33-201ENST00000362591 102 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 RNU6-1309P-201ENST00000363305 108 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 RNA5SP189-201ENST00000364920 115 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 Y_RNA.324-201ENST00000365165 102 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 MIR517A-201ENST00000385001 87 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms