Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.71□□□□□ -1.49
NUBP1P53384 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
NUBP1P53384 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NUBP1P53384 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
NUBP1P53384 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NUBP1P53384 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.71□□□□□ -1.5
NUBP1P53384 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUBP1P53384 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.71□□□□□ -1.5
NUBP1P53384 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NUBP1P53384 JPX-212ENST00000639185 9658 ntTSL 5 BASIC5.71□□□□□ -1.5
NUBP1P53384 SNORA17.1-201ENST00000362945 126 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 RNU6-1138P-201ENST00000365359 106 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 MIR590-201ENST00000385008 97 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 MIR551A-201ENST00000385042 96 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.71□□□□□ -1.5
NUBP1P53384 MTATP8P2-201ENST00000435212 202 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 SNORD65B-201ENST00000459126 73 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 RNU7-57P-201ENST00000459540 60 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 RPL27AP5-201ENST00000469428 449 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 RNU6-109P-201ENST00000516364 107 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 RNU6-184P-201ENST00000516514 107 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 AC092490.3-201ENST00000545370 572 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 BNIP3P1-201ENST00000547295 580 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 AC106785.1-201ENST00000565935 262 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 HSPE1P7-201ENST00000604681 321 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 AC024255.1-201ENST00000614376 102 ntBASIC5.71□□□□□ -1.5
NUBP1P53384 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.71□□□□□ -1.5
NUBP1P53384 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NUBP1P53384 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUBP1P53384 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUBP1P53384 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUBP1P53384 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC5.71□□□□□ -1.5
NUBP1P53384 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUBP1P53384 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NUBP1P53384 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUBP1P53384 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
NUBP1P53384 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUBP1P53384 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NUBP1P53384 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NUBP1P53384 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUBP1P53384 AC007656.2-201ENST00000624902 4547 ntBASIC5.7□□□□□ -1.5
NUBP1P53384 AC068254.2-201ENST00000623938 3577 ntBASIC5.7□□□□□ -1.5
NUBP1P53384 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUBP1P53384 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUBP1P53384 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
NUBP1P53384 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.7□□□□□ -1.5
NUBP1P53384 U3.2-201ENST00000362981 210 ntBASIC5.7□□□□□ -1.5
NUBP1P53384 RNU1-32P-201ENST00000363937 159 ntBASIC5.7□□□□□ -1.5
NUBP1P53384 YME1L1P1-201ENST00000429435 297 ntBASIC5.7□□□□□ -1.5
NUBP1P53384 SDC4P-201ENST00000453285 601 ntBASIC5.7□□□□□ -1.5
NUBP1P53384 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.7□□□□□ -1.5
NUBP1P53384 RNA5SP236-201ENST00000516169 116 ntBASIC5.7□□□□□ -1.5
NUBP1P53384 RNU6-504P-201ENST00000516568 104 ntBASIC5.7□□□□□ -1.5
NUBP1P53384 RNU6-63P-201ENST00000516690 95 ntBASIC5.7□□□□□ -1.5
NUBP1P53384 IGKV3-31-201ENST00000523109 329 ntBASIC5.7□□□□□ -1.5
NUBP1P53384 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.7□□□□□ -1.5
NUBP1P53384 AL929325.1-201ENST00000603096 117 ntBASIC5.7□□□□□ -1.5
NUBP1P53384 AC091152.3-201ENST00000604227 325 ntBASIC5.7□□□□□ -1.5
NUBP1P53384 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUBP1P53384 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NUBP1P53384 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUBP1P53384 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
NUBP1P53384 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NUBP1P53384 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NUBP1P53384 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUBP1P53384 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.69□□□□□ -1.5
NUBP1P53384 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUBP1P53384 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUBP1P53384 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NUBP1P53384 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUBP1P53384 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUBP1P53384 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.69□□□□□ -1.5
NUBP1P53384 Z95114.1-201ENST00000624264 14574 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUBP1P53384 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUBP1P53384 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NUBP1P53384 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.69□□□□□ -1.5
NUBP1P53384 SNURFL-201ENST00000309296 343 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 Y_RNA.78-201ENST00000362970 110 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 RNU6-1134P-201ENST00000365156 101 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 RNA5SP30-201ENST00000365552 115 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 MIR759-201ENST00000390224 91 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 AL139095.1-201ENST00000404326 391 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 RNA5SP511-201ENST00000410487 115 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 AC011753.3-201ENST00000443436 406 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC5.69□□□□□ -1.5
NUBP1P53384 AC010531.2-201ENST00000465012 153 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 RNU5F-4P-201ENST00000516581 114 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 RNU7-149P-201ENST00000516739 59 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 AL110118.1-201ENST00000553543 400 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 VN1R85P-201ENST00000601587 426 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC5.69□□□□□ -1.5
NUBP1P53384 MALAT1.1-201ENST00000618249 95 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NUBP1P53384 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NUBP1P53384 AC140134.1-201ENST00000511830 3544 ntBASIC5.69□□□□□ -1.5
NUBP1P53384 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.69□□□□□ -1.5
NUBP1P53384 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NUBP1P53384 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms