Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL157834.3-201ENST00000615543 103 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 AL078604.3-201ENST00000615580 211 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 AC084824.4-201ENST00000620106 731 ntBASIC0.88□□□□□ -2.27
GTF2A1P52655 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
GTF2A1P52655 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.87□□□□□ -2.27
GTF2A1P52655 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 MIR515-2-201ENST00000384883 83 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 MIR515-1-201ENST00000384884 83 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 RNU2-48P-201ENST00000410694 191 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 NCOR1P3-201ENST00000420479 303 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 RPS6P15-201ENST00000431996 751 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.87□□□□□ -2.27
GTF2A1P52655 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.87□□□□□ -2.27
GTF2A1P52655 MTCYBP11-201ENST00000447254 1109 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 OFD1P3Y-201ENST00000453312 783 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 PTP4A1P4-201ENST00000512479 322 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.87□□□□□ -2.27
GTF2A1P52655 RNU6-703P-201ENST00000516946 107 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 RPS3AP4-201ENST00000555161 764 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.87□□□□□ -2.27
GTF2A1P52655 AC106800.4-201ENST00000614905 153 ntBASIC0.87□□□□□ -2.27
GTF2A1P52655 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
GTF2A1P52655 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.86□□□□□ -2.27
GTF2A1P52655 AC008163.1-202ENST00000636004 2889 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 SUGT1P1-201ENST00000379514 476 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 RNU6-637P-201ENST00000384050 107 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
GTF2A1P52655 SNORA11.2-201ENST00000408318 127 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 USP9YP26-201ENST00000421008 661 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 USP9YP18-201ENST00000425912 695 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 MTCO1P44-201ENST00000441935 243 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 RNFT1P2-201ENST00000443064 757 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 USP9YP17-201ENST00000444617 696 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 AC013267.1-201ENST00000458227 267 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.86□□□□□ -2.27
GTF2A1P52655 RPL21P47-201ENST00000483696 477 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.86□□□□□ -2.27
GTF2A1P52655 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.86□□□□□ -2.27
GTF2A1P52655 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.86□□□□□ -2.27
GTF2A1P52655 AC012414.6-201ENST00000568241 401 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 AC090615.1-201ENST00000577519 154 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 RN7SL622P-201ENST00000585292 275 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 AL139344.1-201ENST00000605228 195 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.86□□□□□ -2.27
GTF2A1P52655 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 AC138627.2-201ENST00000624202 601 ntBASIC0.86□□□□□ -2.27
GTF2A1P52655 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
GTF2A1P52655 AC092125.1-201ENST00000562568 1995 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 MIR764-201ENST00000390811 85 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 MIR1261-201ENST00000408659 82 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 MIR1267-201ENST00000408723 78 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 AC069282.1-201ENST00000411911 526 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
GTF2A1P52655 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.85□□□□□ -2.27
GTF2A1P52655 AL139421.1-201ENST00000423010 169 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 AL591806.2-201ENST00000433122 173 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 USP9YP22-201ENST00000438971 294 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.85□□□□□ -2.27
GTF2A1P52655 RPL39P6-201ENST00000448289 150 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 MTND5P8-201ENST00000449817 1083 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 HMGN2P18-201ENST00000450680 270 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 AP001025.1-201ENST00000486139 332 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 AC010409.1-201ENST00000487382 476 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 TMEM251P1-201ENST00000503717 318 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 CENPUP1-201ENST00000526649 1202 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 AC087441.2-201ENST00000529141 262 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.85□□□□□ -2.27
GTF2A1P52655 AL731537.2-201ENST00000561565 951 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 MIR4666A-201ENST00000580160 79 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 AC009977.1-201ENST00000586015 570 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 RPL30P11-203ENST00000598995 310 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 CLIC4P2-201ENST00000601934 717 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 AL390208.1-201ENST00000605885 644 ntBASIC0.85□□□□□ -2.27
GTF2A1P52655 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
GTF2A1P52655 RNU6-353P-201ENST00000364266 108 ntBASIC0.84□□□□□ -2.27
GTF2A1P52655 SNORD1A-201ENST00000364968 72 ntBASIC0.84□□□□□ -2.27
GTF2A1P52655 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
GTF2A1P52655 MIR100-201ENST00000385259 80 ntBASIC0.84□□□□□ -2.27
GTF2A1P52655 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
GTF2A1P52655 DHFRP6-201ENST00000401776 268 ntBASIC0.84□□□□□ -2.27
GTF2A1P52655 RPS12P24-201ENST00000412619 387 ntBASIC0.84□□□□□ -2.27
GTF2A1P52655 AP1B1P2-201ENST00000416196 106 ntBASIC0.84□□□□□ -2.27
GTF2A1P52655 PIGFP2-201ENST00000421400 651 ntBASIC0.84□□□□□ -2.27
GTF2A1P52655 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.84□□□□□ -2.27
GTF2A1P52655 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.84□□□□□ -2.27
GTF2A1P52655 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.84□□□□□ -2.27
GTF2A1P52655 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.84□□□□□ -2.27
GTF2A1P52655 MIR4661-201ENST00000582720 75 ntBASIC0.84□□□□□ -2.27
GTF2A1P52655 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.84□□□□□ -2.27
GTF2A1P52655 AC004908.3-201ENST00000610248 625 ntBASIC0.84□□□□□ -2.27
GTF2A1P52655 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
GTF2A1P52655 RNU6-1066P-201ENST00000363573 105 ntBASIC0.83□□□□□ -2.28
GTF2A1P52655 RNU6-414P-201ENST00000363705 104 ntBASIC0.83□□□□□ -2.28
GTF2A1P52655 RNU4-51P-201ENST00000364206 140 ntBASIC0.83□□□□□ -2.28
GTF2A1P52655 Y_RNA.234-201ENST00000364409 97 ntBASIC0.83□□□□□ -2.28
GTF2A1P52655 RNU6-611P-201ENST00000384276 104 ntBASIC0.83□□□□□ -2.28
GTF2A1P52655 MIR506-201ENST00000384998 124 ntBASIC0.83□□□□□ -2.28
GTF2A1P52655 RN7SKP284-201ENST00000411002 343 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms