Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC007182.2-201ENST00000489251 402 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 SCARNA3-201ENST00000517097 143 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.44□□□□□ -2.02
PTPN4P29074 AP002453.2-201ENST00000533503 320 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 MIR3199-1-201ENST00000582434 88 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 AC087752.4-201ENST00000605911 462 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.44□□□□□ -2.02
PTPN4P29074 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
PTPN4P29074 AC025034.2-201ENST00000623264 286 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 PISRT1-201ENST00000626175 531 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 AL512643.1-201ENST00000635735 524 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.44□□□□□ -2.02
PTPN4P29074 AC007336.1-201ENST00000576365 3828 ntBASIC2.44□□□□□ -2.02
PTPN4P29074 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
PTPN4P29074 RNU6-288P-201ENST00000363690 104 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 RNU6-395P-201ENST00000365662 106 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.43□□□□□ -2.02
PTPN4P29074 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
PTPN4P29074 ELOCP4-201ENST00000420090 333 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 AL109913.1-201ENST00000421173 514 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 MED13P1-201ENST00000428342 171 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.43□□□□□ -2.02
PTPN4P29074 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.43□□□□□ -2.02
PTPN4P29074 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.43□□□□□ -2.02
PTPN4P29074 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.43□□□□□ -2.02
PTPN4P29074 RNU6-956P-201ENST00000458868 103 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.43□□□□□ -2.02
PTPN4P29074 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.43□□□□□ -2.02
PTPN4P29074 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.43□□□□□ -2.02
PTPN4P29074 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.43□□□□□ -2.02
PTPN4P29074 RNU6-1315P-201ENST00000517187 99 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 AC022616.3-201ENST00000523940 148 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 AC078814.3-201ENST00000553036 491 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.43□□□□□ -2.02
PTPN4P29074 AC119751.7-201ENST00000600494 245 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 AC090578.1-201ENST00000604955 591 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 AC022893.3-201ENST00000607665 437 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 AL589743.7-201ENST00000612637 233 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 AC005332.10-201ENST00000612725 619 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 U4.3-201ENST00000621047 82 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 U6.99-201ENST00000637524 83 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.43□□□□□ -2.02
PTPN4P29074 FARSBP1-201ENST00000435808 1778 ntBASIC2.43□□□□□ -2.02
PTPN4P29074 ZNF720P1-201ENST00000562403 1939 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
PTPN4P29074 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.42□□□□□ -2.02
PTPN4P29074 MIR21-201ENST00000362134 72 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 RNU6-188P-201ENST00000364207 107 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 RNU1-52P-201ENST00000384190 164 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 RNU6-39P-201ENST00000384344 107 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 Y_RNA.534-201ENST00000384599 112 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 Y_RNA.553-201ENST00000384670 102 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 MIR27B-201ENST00000385129 97 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 RPS3AP36-201ENST00000398190 775 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 RPS4XP7-201ENST00000406274 780 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 RNU6-195P-201ENST00000411352 109 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.42□□□□□ -2.02
PTPN4P29074 AL360221.1-201ENST00000445989 335 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 FTH1P25-201ENST00000447665 469 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.42□□□□□ -2.02
PTPN4P29074 AC010424.1-201ENST00000506336 297 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 ARL2BPP4-201ENST00000506854 471 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.42□□□□□ -2.02
PTPN4P29074 RNA5SP24-201ENST00000516478 95 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 SNORA18.6-201ENST00000516792 115 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 RNU6-1220P-201ENST00000517126 108 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.42□□□□□ -2.02
PTPN4P29074 AC243972.3-201ENST00000539655 198 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 AC006199.1-201ENST00000548728 219 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 AC027176.1-201ENST00000560204 514 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 AC137800.2-201ENST00000574375 120 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 MIR5571-201ENST00000577998 113 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 MIR3167-201ENST00000579623 85 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 SNORD53-201ENST00000579969 78 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.42□□□□□ -2.02
PTPN4P29074 NRBF2P1-201ENST00000587407 859 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 AC007621.1-201ENST00000604544 437 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 AL021997.1-201ENST00000605757 193 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 AC010678.1-201ENST00000614118 713 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 AC064859.1-201ENST00000624741 174 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 AC110994.2-201ENST00000635481 492 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 AL390237.1-201ENST00000404226 1415 ntBASIC2.42□□□□□ -2.02
PTPN4P29074 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
PTPN4P29074 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PTPN4P29074 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PTPN4P29074 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.41□□□□□ -2.02
PTPN4P29074 RNA5SP456-201ENST00000364002 114 ntBASIC2.41□□□□□ -2.02
PTPN4P29074 Y_RNA.201-201ENST00000364052 96 ntBASIC2.41□□□□□ -2.02
PTPN4P29074 RNU1-51P-201ENST00000365345 176 ntBASIC2.41□□□□□ -2.02
PTPN4P29074 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PTPN4P29074 SNORA20.2-201ENST00000383922 131 ntBASIC2.41□□□□□ -2.02
PTPN4P29074 SNORA75-201ENST00000384158 137 ntBASIC2.41□□□□□ -2.02
PTPN4P29074 SNORA70B-201ENST00000384210 135 ntBASIC2.41□□□□□ -2.02
PTPN4P29074 RNU6-348P-201ENST00000384386 107 ntBASIC2.41□□□□□ -2.02
PTPN4P29074 RNU6-19P-201ENST00000384718 107 ntBASIC2.41□□□□□ -2.02
PTPN4P29074 RNU6-220P-201ENST00000390919 107 ntBASIC2.41□□□□□ -2.02
PTPN4P29074 RNU6-387P-201ENST00000411331 105 ntBASIC2.41□□□□□ -2.02
PTPN4P29074 AC127391.1-201ENST00000411737 98 ntBASIC2.41□□□□□ -2.02
PTPN4P29074 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms