Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 MTCO3P4-201ENST00000419236 787 ntBASIC0.28□□□□□ -2.36
ACANP16112 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.28□□□□□ -2.36
ACANP16112 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.28□□□□□ -2.36
ACANP16112 RPL37P21-201ENST00000435890 276 ntBASIC0.28□□□□□ -2.36
ACANP16112 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.28□□□□□ -2.36
ACANP16112 RNU6-775P-201ENST00000459318 96 ntBASIC0.28□□□□□ -2.36
ACANP16112 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.28□□□□□ -2.36
ACANP16112 AC112206.3-201ENST00000514578 389 ntBASIC0.28□□□□□ -2.36
ACANP16112 SCARNA3-201ENST00000517097 143 ntBASIC0.28□□□□□ -2.36
ACANP16112 RNA5SP165-201ENST00000517142 115 ntBASIC0.28□□□□□ -2.36
ACANP16112 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.28□□□□□ -2.36
ACANP16112 AP001269.3-201ENST00000588718 329 ntBASIC0.28□□□□□ -2.36
ACANP16112 AL009028.1-201ENST00000604895 802 ntBASIC0.28□□□□□ -2.36
ACANP16112 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.28□□□□□ -2.36
ACANP16112 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.28□□□□□ -2.36
ACANP16112 RNU1-58P-201ENST00000362413 163 ntBASIC0.28□□□□□ -2.36
ACANP16112 Y_RNA.228-201ENST00000364346 98 ntBASIC0.28□□□□□ -2.36
ACANP16112 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.28□□□□□ -2.36
ACANP16112 AC096920.1-201ENST00000423991 241 ntBASIC0.28□□□□□ -2.36
ACANP16112 RSL24D1P8-201ENST00000434442 492 ntBASIC0.28□□□□□ -2.36
ACANP16112 RPL7P29-201ENST00000437151 728 ntBASIC0.28□□□□□ -2.36
ACANP16112 MTND4P6-201ENST00000438297 472 ntBASIC0.28□□□□□ -2.36
ACANP16112 AC092393.1-201ENST00000439625 742 ntBASIC0.28□□□□□ -2.36
ACANP16112 AL096803.2-201ENST00000450032 677 ntBASIC0.28□□□□□ -2.36
ACANP16112 HAUS1P3-201ENST00000523909 662 ntBASIC0.28□□□□□ -2.36
ACANP16112 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.28□□□□□ -2.36
ACANP16112 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.28□□□□□ -2.36
ACANP16112 AL355297.3-201ENST00000604082 446 ntBASIC0.28□□□□□ -2.36
ACANP16112 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.28□□□□□ -2.36
ACANP16112 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.28□□□□□ -2.36
ACANP16112 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
ACANP16112 Y_RNA.28-201ENST00000362554 111 ntBASIC0.27□□□□□ -2.37
ACANP16112 RNU6-1074P-201ENST00000383995 104 ntBASIC0.27□□□□□ -2.37
ACANP16112 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
ACANP16112 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.27□□□□□ -2.37
ACANP16112 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.27□□□□□ -2.37
ACANP16112 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.27□□□□□ -2.37
ACANP16112 RNU6-889P-201ENST00000517189 103 ntBASIC0.27□□□□□ -2.37
ACANP16112 AC006518.2-201ENST00000542513 940 ntBASIC0.27□□□□□ -2.37
ACANP16112 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.27□□□□□ -2.37
ACANP16112 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.27□□□□□ -2.37
ACANP16112 AC005668.1-201ENST00000571142 476 ntBASIC0.27□□□□□ -2.37
ACANP16112 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC0.27□□□□□ -2.37
ACANP16112 HMGN2P15-201ENST00000585707 270 ntBASIC0.27□□□□□ -2.37
ACANP16112 BNIP3P25-201ENST00000596023 559 ntBASIC0.27□□□□□ -2.37
ACANP16112 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.27□□□□□ -2.37
ACANP16112 FRG1HP-204ENST00000617940 757 ntBASIC0.27□□□□□ -2.37
ACANP16112 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.27□□□□□ -2.37
ACANP16112 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
ACANP16112 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
ACANP16112 SNORD3E-201ENST00000362899 217 ntBASIC0.27□□□□□ -2.37
ACANP16112 RSU1P2-202ENST00000437884 485 ntBASIC0.27□□□□□ -2.37
ACANP16112 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.27□□□□□ -2.37
ACANP16112 SNORD124-201ENST00000459577 104 ntBASIC0.27□□□□□ -2.37
ACANP16112 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.27□□□□□ -2.37
ACANP16112 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.27□□□□□ -2.37
ACANP16112 AC092470.1-201ENST00000546187 132 ntBASIC0.27□□□□□ -2.37
ACANP16112 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.27□□□□□ -2.37
ACANP16112 AC073111.2-201ENST00000605657 1075 ntBASIC0.27□□□□□ -2.37
ACANP16112 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.27□□□□□ -2.37
ACANP16112 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.26□□□□□ -2.37
ACANP16112 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
ACANP16112 AC013410.2-201ENST00000422627 201 ntBASIC0.26□□□□□ -2.37
ACANP16112 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.26□□□□□ -2.37
ACANP16112 MTCYBP3-201ENST00000445588 1137 ntBASIC0.26□□□□□ -2.37
ACANP16112 OR52A4P-202ENST00000481634 799 ntBASIC0.26□□□□□ -2.37
ACANP16112 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.26□□□□□ -2.37
ACANP16112 AC138853.1-201ENST00000503549 823 ntBASIC0.26□□□□□ -2.37
ACANP16112 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.26□□□□□ -2.37
ACANP16112 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.26□□□□□ -2.37
ACANP16112 SNORA70.16-201ENST00000516390 95 ntBASIC0.26□□□□□ -2.37
ACANP16112 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.26□□□□□ -2.37
ACANP16112 IGKV1-22-201ENST00000524313 326 ntBASIC0.26□□□□□ -2.37
ACANP16112 AC090888.1-201ENST00000561335 1141 ntBASIC0.26□□□□□ -2.37
ACANP16112 AC004817.2-201ENST00000561794 651 ntBASIC0.26□□□□□ -2.37
ACANP16112 AC087481.2-201ENST00000565492 330 ntBASIC0.26□□□□□ -2.37
ACANP16112 AC022254.1-201ENST00000567857 235 ntBASIC0.26□□□□□ -2.37
ACANP16112 MIR5190-201ENST00000581537 80 ntBASIC0.26□□□□□ -2.37
ACANP16112 AL355877.2-201ENST00000603670 358 ntBASIC0.26□□□□□ -2.37
ACANP16112 AL138726.1-201ENST00000614873 333 ntBASIC0.26□□□□□ -2.37
ACANP16112 AL078604.3-201ENST00000615580 211 ntBASIC0.26□□□□□ -2.37
ACANP16112 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC0.26□□□□□ -2.37
ACANP16112 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
ACANP16112 RNU6-833P-201ENST00000363486 107 ntBASIC0.26□□□□□ -2.37
ACANP16112 RNY4P7-201ENST00000364600 96 ntBASIC0.26□□□□□ -2.37
ACANP16112 RNU6-338P-201ENST00000383888 105 ntBASIC0.26□□□□□ -2.37
ACANP16112 RNU6-821P-201ENST00000390995 107 ntBASIC0.26□□□□□ -2.37
ACANP16112 RNA5SP212-201ENST00000391223 107 ntBASIC0.26□□□□□ -2.37
ACANP16112 BTF3L4P2-201ENST00000392798 346 ntBASIC0.26□□□□□ -2.37
ACANP16112 RPS3AP1-201ENST00000413190 320 ntBASIC0.26□□□□□ -2.37
ACANP16112 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.26□□□□□ -2.37
ACANP16112 RPS25P9-201ENST00000435591 252 ntBASIC0.26□□□□□ -2.37
ACANP16112 AL034418.1-201ENST00000448675 860 ntBASIC0.26□□□□□ -2.37
ACANP16112 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
ACANP16112 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.26□□□□□ -2.37
ACANP16112 RNU7-23P-201ENST00000459465 62 ntBASIC0.26□□□□□ -2.37
ACANP16112 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.26□□□□□ -2.37
ACANP16112 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.26□□□□□ -2.37
ACANP16112 AC034114.1-201ENST00000520293 285 ntBASIC0.26□□□□□ -2.37
ACANP16112 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms