Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC012314.7-201ENST00000619693 93 ntBASIC2.96□□□□□ -1.94
UBL4AP11441 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.96□□□□□ -1.94
UBL4AP11441 SCARNA4-202ENST00000625402 129 ntBASIC2.96□□□□□ -1.94
UBL4AP11441 AC068137.3-201ENST00000639191 341 ntBASIC2.96□□□□□ -1.94
UBL4AP11441 AC073869.6-201ENST00000640656 341 ntBASIC2.96□□□□□ -1.94
UBL4AP11441 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
UBL4AP11441 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.96□□□□□ -1.94
UBL4AP11441 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
UBL4AP11441 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
UBL4AP11441 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
UBL4AP11441 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
UBL4AP11441 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.95□□□□□ -1.94
UBL4AP11441 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
UBL4AP11441 AL353743.1-202ENST00000431724 1695 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.95□□□□□ -1.94
UBL4AP11441 AC004520.1-201ENST00000608362 1413 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
UBL4AP11441 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
UBL4AP11441 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
UBL4AP11441 SNORD56.5-201ENST00000364281 72 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 SNORA68.1-201ENST00000364537 132 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 RNU1-109P-201ENST00000383960 147 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 Y_RNA.554-201ENST00000384672 102 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 SNORA48.7-201ENST00000391302 135 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.95□□□□□ -1.94
UBL4AP11441 RNU6-648P-201ENST00000410190 107 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 RN7SKP27-201ENST00000410684 333 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 AL513477.1-202ENST00000417061 214 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.95□□□□□ -1.94
UBL4AP11441 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.95□□□□□ -1.94
UBL4AP11441 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.95□□□□□ -1.94
UBL4AP11441 AC006026.2-201ENST00000457376 180 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 AC091885.1-201ENST00000506658 268 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.95□□□□□ -1.94
UBL4AP11441 AC114781.4-201ENST00000513707 639 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 RNU4-29P-201ENST00000515943 174 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 ACA59.2-201ENST00000517061 156 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 SCARNA20.6-201ENST00000517251 106 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.95□□□□□ -1.94
UBL4AP11441 AP004607.1-201ENST00000524456 203 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.95□□□□□ -1.94
UBL4AP11441 U2.17-201ENST00000611454 95 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 AC107871.2-201ENST00000612894 502 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 MIR7975-201ENST00000619350 68 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 AC026585.1-201ENST00000619582 524 ntBASIC2.95□□□□□ -1.94
UBL4AP11441 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.95□□□□□ -1.94
UBL4AP11441 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
UBL4AP11441 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UBL4AP11441 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
UBL4AP11441 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
UBL4AP11441 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
UBL4AP11441 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
UBL4AP11441 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UBL4AP11441 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.94□□□□□ -1.94
UBL4AP11441 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UBL4AP11441 SNORA71.3-201ENST00000362582 128 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 Y_RNA.324-201ENST00000365165 102 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 Y_RNA.402-201ENST00000383972 102 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 RNU6-748P-201ENST00000384648 107 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 MIR147B-201ENST00000390185 80 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 U3.19-201ENST00000390893 196 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 FTH1P15-201ENST00000406984 280 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 MTCO1P20-201ENST00000425366 358 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 YME1L1P1-201ENST00000429435 297 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 AL513043.1-201ENST00000439124 535 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.94□□□□□ -1.94
UBL4AP11441 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.94□□□□□ -1.94
UBL4AP11441 Z96811.1-201ENST00000445880 108 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.94□□□□□ -1.94
UBL4AP11441 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.94□□□□□ -1.94
UBL4AP11441 PRSS3P4-201ENST00000453323 162 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.94□□□□□ -1.94
UBL4AP11441 RNU7-167P-201ENST00000459160 62 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 MTCO3P38-201ENST00000468910 766 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.94□□□□□ -1.94
UBL4AP11441 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
UBL4AP11441 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.94□□□□□ -1.94
UBL4AP11441 RNU5F-8P-201ENST00000515941 111 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 SCARNA17.1-201ENST00000516211 143 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 SCARNA17.2-201ENST00000516334 143 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 SNORD60.2-201ENST00000516883 86 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.94□□□□□ -1.94
UBL4AP11441 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.94□□□□□ -1.94
UBL4AP11441 AC136619.2-201ENST00000563361 631 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 AL138976.2-201ENST00000563989 694 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 MTCO3P13-201ENST00000577757 781 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 uc_338.14-201ENST00000613162 166 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 AC011890.2-201ENST00000613393 294 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 uc_338.25-201ENST00000613756 156 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 SCARNA17.4-201ENST00000614296 143 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 AC084757.4-201ENST00000616350 526 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 AC010378.1-201ENST00000619270 362 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 MIR6075-201ENST00000620782 95 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 YWHAEP7-203ENST00000622054 312 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 AP003400.5-201ENST00000624827 617 ntBASIC2.94□□□□□ -1.94
UBL4AP11441 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.94□□□□□ -1.94
UBL4AP11441 MIR7515-201ENST00000637837 67 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms