Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFAP04085 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
PDGFAP04085 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFAP04085 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PDGFAP04085 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
PDGFAP04085 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.44□□□□□ -1.7
PDGFAP04085 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
PDGFAP04085 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFAP04085 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFAP04085 MAPK10-320ENST00000641462 6696 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PDGFAP04085 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFAP04085 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFAP04085 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFAP04085 RNU6-1159P-201ENST00000362933 107 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 U8.10-201ENST00000384260 133 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 MIR10B-201ENST00000385011 110 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 RPL21P17-201ENST00000397467 475 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 RN7SKP61-201ENST00000410642 295 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 RN7SKP27-201ENST00000410684 333 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 AC017079.2-201ENST00000416102 485 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 COX6CP13-201ENST00000428703 226 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 WARS2P1-201ENST00000429678 537 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 RPL26P9-201ENST00000457466 433 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 RPS17P2-201ENST00000461663 408 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PDGFAP04085 RN7SL441P-201ENST00000492388 296 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.43□□□□□ -1.7
PDGFAP04085 RNU2-31P-201ENST00000516954 155 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 IGKV2D-19-201ENST00000523346 262 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFAP04085 AC133555.2-201ENST00000550213 292 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 MIR3529-201ENST00000637713 78 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFAP04085 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PDGFAP04085 AC018529.3-201ENST00000624212 2254 ntBASIC4.43□□□□□ -1.7
PDGFAP04085 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PDGFAP04085 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.43□□□□□ -1.7
PDGFAP04085 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.43□□□□□ -1.7
PDGFAP04085 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
PDGFAP04085 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFAP04085 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFAP04085 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFAP04085 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PDGFAP04085 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PDGFAP04085 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
PDGFAP04085 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFAP04085 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFAP04085 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFAP04085 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PDGFAP04085 MIR708-201ENST00000390708 88 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 RNU6-159P-201ENST00000391080 106 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 U3.32-201ENST00000408116 212 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 HSPE1P12-201ENST00000412576 301 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.42□□□□□ -1.7
PDGFAP04085 AL645608.4-201ENST00000423619 154 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.42□□□□□ -1.7
PDGFAP04085 AC073901.1-201ENST00000462471 408 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 AC010469.1-201ENST00000463864 576 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.42□□□□□ -1.7
PDGFAP04085 RPS4XP22-201ENST00000480755 780 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 AC091868.1-201ENST00000508746 304 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 RNA5SP249-201ENST00000516127 99 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 RNU7-110P-201ENST00000516891 62 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.42□□□□□ -1.7
PDGFAP04085 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.42□□□□□ -1.7
PDGFAP04085 AC009163.5-201ENST00000575421 637 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.42□□□□□ -1.7
PDGFAP04085 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.42□□□□□ -1.7
PDGFAP04085 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFAP04085 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFAP04085 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDGFAP04085 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
PDGFAP04085 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.42□□□□□ -1.7
PDGFAP04085 AL079305.1-201ENST00000623159 3008 ntBASIC4.42□□□□□ -1.7
PDGFAP04085 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.41□□□□□ -1.7
PDGFAP04085 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.41□□□□□ -1.7
PDGFAP04085 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.41□□□□□ -1.7
PDGFAP04085 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PDGFAP04085 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFAP04085 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFAP04085 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFAP04085 AC068254.2-201ENST00000623938 3577 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PDGFAP04085 AC092268.1-201ENST00000342691 405 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 MIR411-201ENST00000362239 96 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 RNU6-281P-201ENST00000384212 103 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 RNU6-378P-201ENST00000384324 107 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 RNA5SP397-201ENST00000391323 118 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 RN7SKP177-201ENST00000410567 355 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 AL390729.2-201ENST00000416137 156 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 YPEL5P1-201ENST00000419731 367 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 AC078809.1-201ENST00000427601 140 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.41□□□□□ -1.7
PDGFAP04085 AC010618.1-201ENST00000469924 477 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 RNU6-406P-201ENST00000516470 107 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 RNU6-58P-201ENST00000517143 103 ntBASIC4.41□□□□□ -1.7
PDGFAP04085 SNORA31.23-201ENST00000517219 133 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms