Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.63□□□□□ -1.99
SIX3O95343 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.63□□□□□ -1.99
SIX3O95343 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.63□□□□□ -1.99
SIX3O95343 AL135938.1-201ENST00000443141 297 ntBASIC2.63□□□□□ -1.99
SIX3O95343 MTND2P4-201ENST00000445034 1004 ntBASIC2.63□□□□□ -1.99
SIX3O95343 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX3O95343 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX3O95343 RNU7-26P-201ENST00000458980 63 ntBASIC2.63□□□□□ -1.99
SIX3O95343 CKS1BP2-201ENST00000497342 240 ntBASIC2.63□□□□□ -1.99
SIX3O95343 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX3O95343 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.63□□□□□ -1.99
SIX3O95343 SNORA25.11-201ENST00000515935 105 ntBASIC2.63□□□□□ -1.99
SIX3O95343 AC090572.1-201ENST00000519251 160 ntBASIC2.63□□□□□ -1.99
SIX3O95343 OR4R1P-201ENST00000529879 463 ntBASIC2.63□□□□□ -1.99
SIX3O95343 AP000873.5-201ENST00000533906 236 ntBASIC2.63□□□□□ -1.99
SIX3O95343 GTF3AP2-201ENST00000557014 266 ntBASIC2.63□□□□□ -1.99
SIX3O95343 AC092325.1-201ENST00000566449 554 ntBASIC2.63□□□□□ -1.99
SIX3O95343 AC068790.2-201ENST00000602601 557 ntBASIC2.63□□□□□ -1.99
SIX3O95343 AC010678.1-201ENST00000614118 713 ntBASIC2.63□□□□□ -1.99
SIX3O95343 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.63□□□□□ -1.99
SIX3O95343 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SIX3O95343 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.63□□□□□ -1.99
SIX3O95343 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.63□□□□□ -1.99
SIX3O95343 AC009487.2-201ENST00000420969 6821 ntBASIC2.62□□□□□ -1.99
SIX3O95343 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.62□□□□□ -1.99
SIX3O95343 CDC27P3-201ENST00000635418 1910 ntBASIC2.62□□□□□ -1.99
SIX3O95343 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.62□□□□□ -1.99
SIX3O95343 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SIX3O95343 Y_RNA.4-201ENST00000362333 112 ntBASIC2.62□□□□□ -1.99
SIX3O95343 RNU6-486P-201ENST00000363116 107 ntBASIC2.62□□□□□ -1.99
SIX3O95343 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SIX3O95343 Z98749.2-208ENST00000381646 500 ntBASIC2.62□□□□□ -1.99
SIX3O95343 MIR10A-201ENST00000385043 110 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AL133475.1-201ENST00000404414 305 ntBASIC2.62□□□□□ -1.99
SIX3O95343 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SIX3O95343 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.62□□□□□ -1.99
SIX3O95343 AL365338.1-201ENST00000422282 858 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AC133104.1-201ENST00000429100 218 ntBASIC2.62□□□□□ -1.99
SIX3O95343 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.62□□□□□ -1.99
SIX3O95343 AL353706.1-201ENST00000436728 494 ntBASIC2.62□□□□□ -1.99
SIX3O95343 IFNA11P-201ENST00000446352 526 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX3O95343 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX3O95343 CACYBPP2-201ENST00000453625 678 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AC022364.2-201ENST00000457963 554 ntBASIC2.62□□□□□ -1.99
SIX3O95343 snoU109.2-201ENST00000459316 135 ntBASIC2.62□□□□□ -1.99
SIX3O95343 MTND4P2-201ENST00000507767 1203 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX3O95343 AC112206.3-201ENST00000514578 389 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.62□□□□□ -1.99
SIX3O95343 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX3O95343 MIR4635-201ENST00000583759 79 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AC008521.1-201ENST00000587471 187 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AL158827.2-201ENST00000602494 330 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AL022154.1-201ENST00000604698 785 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AC087045.1-201ENST00000605856 382 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AC069294.1-201ENST00000608397 350 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AC006566.1-201ENST00000608943 513 ntBASIC2.62□□□□□ -1.99
SIX3O95343 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.62□□□□□ -1.99
SIX3O95343 AC092656.1-203ENST00000624134 423 ntBASIC2.62□□□□□ -1.99
SIX3O95343 AL691447.3-201ENST00000635020 330 ntBASIC2.62□□□□□ -1.99
SIX3O95343 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.61□□□□□ -1.99
SIX3O95343 MTND5P17-201ENST00000418405 1603 ntBASIC2.61□□□□□ -1.99
SIX3O95343 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SIX3O95343 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SIX3O95343 RNU6-1097P-201ENST00000363586 107 ntBASIC2.61□□□□□ -1.99
SIX3O95343 Y_RNA.367-201ENST00000365544 101 ntBASIC2.61□□□□□ -1.99
SIX3O95343 Y_RNA.576-201ENST00000384781 102 ntBASIC2.61□□□□□ -1.99
SIX3O95343 RNU6-1328P-201ENST00000410938 106 ntBASIC2.61□□□□□ -1.99
SIX3O95343 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX3O95343 AC138623.1-201ENST00000418060 216 ntBASIC2.61□□□□□ -1.99
SIX3O95343 PIGFP2-201ENST00000421400 651 ntBASIC2.61□□□□□ -1.99
SIX3O95343 AL627311.1-201ENST00000431514 115 ntBASIC2.61□□□□□ -1.99
SIX3O95343 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX3O95343 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX3O95343 AC124916.1-201ENST00000444020 547 ntBASIC2.61□□□□□ -1.99
SIX3O95343 KLF3P2-201ENST00000465138 268 ntBASIC2.61□□□□□ -1.99
SIX3O95343 RPS27AP9-201ENST00000477681 438 ntBASIC2.61□□□□□ -1.99
SIX3O95343 AC090096.1-201ENST00000489168 390 ntBASIC2.61□□□□□ -1.99
SIX3O95343 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.61□□□□□ -1.99
SIX3O95343 RNA5SP503-201ENST00000517047 117 ntBASIC2.61□□□□□ -1.99
SIX3O95343 AC109329.2-201ENST00000519658 482 ntBASIC2.61□□□□□ -1.99
SIX3O95343 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.61□□□□□ -1.99
SIX3O95343 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX3O95343 AC234778.2-201ENST00000566241 354 ntBASIC2.61□□□□□ -1.99
SIX3O95343 DEFB122-202ENST00000569013 197 ntBASIC2.61□□□□□ -1.99
SIX3O95343 AC012213.3-201ENST00000577199 777 ntBASIC2.61□□□□□ -1.99
SIX3O95343 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.61□□□□□ -1.99
SIX3O95343 AL359740.1-201ENST00000624340 592 ntBASIC2.61□□□□□ -1.99
SIX3O95343 SEPT14P19-203ENST00000633205 211 ntBASIC2.61□□□□□ -1.99
SIX3O95343 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SIX3O95343 AC135776.4-201ENST00000624300 1904 ntBASIC2.61□□□□□ -1.99
SIX3O95343 AL109809.4-201ENST00000603520 2185 ntBASIC2.61□□□□□ -1.99
SIX3O95343 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SIX3O95343 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.61□□□□□ -1.99
SIX3O95343 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.61□□□□□ -1.99
SIX3O95343 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SIX3O95343 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SIX3O95343 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.6□□□□□ -1.99
SIX3O95343 Y_RNA.269-201ENST00000364685 89 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms