Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC107401.1-201ENST00000503426 685 ntBASIC3.08□□□□□ -1.92
RTN3O95197 FAM92A1P2-202ENST00000504766 877 ntBASIC3.08□□□□□ -1.92
RTN3O95197 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.08□□□□□ -1.92
RTN3O95197 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.08□□□□□ -1.92
RTN3O95197 AP003034.1-201ENST00000534621 422 ntBASIC3.08□□□□□ -1.92
RTN3O95197 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTN3O95197 AC005261.5-201ENST00000596280 355 ntBASIC3.08□□□□□ -1.92
RTN3O95197 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.08□□□□□ -1.92
RTN3O95197 AC012507.3-201ENST00000603556 477 ntBASIC3.08□□□□□ -1.92
RTN3O95197 AC091152.3-201ENST00000604227 325 ntBASIC3.08□□□□□ -1.92
RTN3O95197 AC087045.1-201ENST00000605856 382 ntBASIC3.08□□□□□ -1.92
RTN3O95197 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTN3O95197 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.08□□□□□ -1.92
RTN3O95197 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
RTN3O95197 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RTN3O95197 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.07□□□□□ -1.92
RTN3O95197 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTN3O95197 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTN3O95197 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RTN3O95197 VTRNA1-1-201ENST00000363120 99 ntBASIC3.07□□□□□ -1.92
RTN3O95197 RNU6-1280P-201ENST00000365211 107 ntBASIC3.07□□□□□ -1.92
RTN3O95197 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
RTN3O95197 RNU2-29P-201ENST00000410423 189 ntBASIC3.07□□□□□ -1.92
RTN3O95197 RNA5SP492-201ENST00000411330 114 ntBASIC3.07□□□□□ -1.92
RTN3O95197 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.07□□□□□ -1.92
RTN3O95197 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN3O95197 PTGES3P4-201ENST00000426243 356 ntBASIC3.07□□□□□ -1.92
RTN3O95197 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.07□□□□□ -1.92
RTN3O95197 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.07□□□□□ -1.92
RTN3O95197 Z96811.1-201ENST00000445880 108 ntBASIC3.07□□□□□ -1.92
RTN3O95197 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.07□□□□□ -1.92
RTN3O95197 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN3O95197 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN3O95197 RNU5F-8P-201ENST00000515941 111 ntBASIC3.07□□□□□ -1.92
RTN3O95197 RN7SKP43-201ENST00000516173 320 ntBASIC3.07□□□□□ -1.92
RTN3O95197 RNU6-581P-201ENST00000516214 105 ntBASIC3.07□□□□□ -1.92
RTN3O95197 RNU6-826P-201ENST00000516827 104 ntBASIC3.07□□□□□ -1.92
RTN3O95197 SCARNA11.3-201ENST00000517276 130 ntBASIC3.07□□□□□ -1.92
RTN3O95197 HSPE1P20-201ENST00000538133 289 ntBASIC3.07□□□□□ -1.92
RTN3O95197 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN3O95197 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN3O95197 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN3O95197 AL136363.2-201ENST00000604173 851 ntBASIC3.07□□□□□ -1.92
RTN3O95197 AC017083.3-201ENST00000609955 700 ntBASIC3.07□□□□□ -1.92
RTN3O95197 MIR7106-201ENST00000612419 65 ntBASIC3.07□□□□□ -1.92
RTN3O95197 AL158209.2-201ENST00000619266 216 ntBASIC3.07□□□□□ -1.92
RTN3O95197 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.07□□□□□ -1.92
RTN3O95197 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RTN3O95197 AL355596.1-201ENST00000565399 3996 ntBASIC3.07□□□□□ -1.92
RTN3O95197 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.07□□□□□ -1.92
RTN3O95197 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RTN3O95197 SNORA80A-201ENST00000363922 136 ntBASIC3.06□□□□□ -1.92
RTN3O95197 SNORD14B-201ENST00000364533 90 ntBASIC3.06□□□□□ -1.92
RTN3O95197 SNORA68.1-201ENST00000364537 132 ntBASIC3.06□□□□□ -1.92
RTN3O95197 Y_RNA.517-201ENST00000384551 106 ntBASIC3.06□□□□□ -1.92
RTN3O95197 RNU6-19P-201ENST00000384718 107 ntBASIC3.06□□□□□ -1.92
RTN3O95197 MIR34A-201ENST00000385130 110 ntBASIC3.06□□□□□ -1.92
RTN3O95197 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RTN3O95197 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RTN3O95197 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.06□□□□□ -1.92
RTN3O95197 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.06□□□□□ -1.92
RTN3O95197 AC000111.3-201ENST00000433478 193 ntBASIC3.06□□□□□ -1.92
RTN3O95197 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.06□□□□□ -1.92
RTN3O95197 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.06□□□□□ -1.92
RTN3O95197 AC027673.1-201ENST00000456245 405 ntBASIC3.06□□□□□ -1.92
RTN3O95197 AC107626.1-201ENST00000471084 183 ntBASIC3.06□□□□□ -1.92
RTN3O95197 RPS27AP9-201ENST00000477681 438 ntBASIC3.06□□□□□ -1.92
RTN3O95197 AP004217.1-201ENST00000480579 346 ntBASIC3.06□□□□□ -1.92
RTN3O95197 GZMAP1-201ENST00000503054 631 ntBASIC3.06□□□□□ -1.92
RTN3O95197 AC092436.1-201ENST00000506450 503 ntBASIC3.06□□□□□ -1.92
RTN3O95197 AC116655.1-201ENST00000508324 901 ntBASIC3.06□□□□□ -1.92
RTN3O95197 AC104136.1-201ENST00000512969 394 ntBASIC3.06□□□□□ -1.92
RTN3O95197 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.06□□□□□ -1.92
RTN3O95197 SCARNA17.1-201ENST00000516211 143 ntBASIC3.06□□□□□ -1.92
RTN3O95197 SCARNA17.2-201ENST00000516334 143 ntBASIC3.06□□□□□ -1.92
RTN3O95197 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.06□□□□□ -1.92
RTN3O95197 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.06□□□□□ -1.92
RTN3O95197 AC093536.2-201ENST00000565257 1406 ntBASIC3.06□□□□□ -1.92
RTN3O95197 AC092325.1-201ENST00000566449 554 ntBASIC3.06□□□□□ -1.92
RTN3O95197 AC008752.3-201ENST00000588113 712 ntBASIC3.06□□□□□ -1.92
RTN3O95197 AC078795.2-201ENST00000602835 1252 ntBASIC3.06□□□□□ -1.92
RTN3O95197 SCARNA17.4-201ENST00000614296 143 ntBASIC3.06□□□□□ -1.92
RTN3O95197 AC015540.1-201ENST00000615828 501 ntBASIC3.06□□□□□ -1.92
RTN3O95197 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.06□□□□□ -1.92
RTN3O95197 MIR6863-201ENST00000636112 90 ntBASIC3.06□□□□□ -1.92
RTN3O95197 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.05□□□□□ -1.92
RTN3O95197 AC004520.1-201ENST00000608362 1413 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AL139276.1-201ENST00000311910 1001 ntBASIC3.05□□□□□ -1.92
RTN3O95197 OR4G2P-201ENST00000328113 903 ntBASIC3.05□□□□□ -1.92
RTN3O95197 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RTN3O95197 RNU6-517P-201ENST00000384362 110 ntBASIC3.05□□□□□ -1.92
RTN3O95197 MIR10A-201ENST00000385043 110 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AC068050.1-201ENST00000394891 380 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AL592148.1-201ENST00000413568 445 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AL353621.1-201ENST00000418219 243 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AL353193.1-201ENST00000421444 268 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AL513043.1-201ENST00000439124 535 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AL118520.1-201ENST00000450770 291 ntBASIC3.05□□□□□ -1.92
RTN3O95197 AC008571.1-201ENST00000467232 300 ntBASIC3.05□□□□□ -1.92
RTN3O95197 RPL9P33-201ENST00000484311 566 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms