Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 BRDTP1-201ENST00000605735 677 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF40AO75400 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PRPF40AO75400 MIR3653-201ENST00000625572 110 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 AL691447.3-201ENST00000635020 330 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 U4.7-201ENST00000638126 106 ntBASIC4.62□□□□□ -1.67
PRPF40AO75400 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PRPF40AO75400 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF40AO75400 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PRPF40AO75400 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.61□□□□□ -1.67
PRPF40AO75400 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.61□□□□□ -1.67
PRPF40AO75400 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF40AO75400 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.61□□□□□ -1.67
PRPF40AO75400 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.61□□□□□ -1.67
PRPF40AO75400 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF40AO75400 Y_RNA.176-201ENST00000363815 109 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 RNU6-450P-201ENST00000364654 107 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 U3.37-201ENST00000408528 213 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 MIR1251-201ENST00000408552 70 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 HMGB3P2-201ENST00000411913 584 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.61□□□□□ -1.67
PRPF40AO75400 AC108032.1-201ENST00000416706 207 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 AC004975.1-201ENST00000428733 208 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 HMGB3P8-201ENST00000449709 577 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PRPF40AO75400 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.61□□□□□ -1.67
PRPF40AO75400 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.61□□□□□ -1.67
PRPF40AO75400 UBE2CP3-201ENST00000502715 450 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 AP000889.1-201ENST00000530968 660 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 AP002404.1-201ENST00000532005 451 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.61□□□□□ -1.67
PRPF40AO75400 TVP23BP1-201ENST00000557500 617 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 LINC00933-203ENST00000559812 219 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 CYCSP39-201ENST00000565821 309 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.61□□□□□ -1.67
PRPF40AO75400 AC004584.2-201ENST00000570407 410 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.61□□□□□ -1.67
PRPF40AO75400 SNORD58B-201ENST00000607313 66 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 AC023043.4-201ENST00000612081 449 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 AL110115.1-201ENST00000614396 364 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.61□□□□□ -1.67
PRPF40AO75400 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
PRPF40AO75400 AC008669.1-201ENST00000565823 2178 ntBASIC4.61□□□□□ -1.67
PRPF40AO75400 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.61□□□□□ -1.67
PRPF40AO75400 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF40AO75400 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF40AO75400 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF40AO75400 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.6□□□□□ -1.67
PRPF40AO75400 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF40AO75400 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.6□□□□□ -1.67
PRPF40AO75400 RNU6-700P-201ENST00000391043 107 ntBASIC4.6□□□□□ -1.67
PRPF40AO75400 RNA5SP31-201ENST00000411144 127 ntBASIC4.6□□□□□ -1.67
PRPF40AO75400 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF40AO75400 AC007389.2-201ENST00000434630 306 ntBASIC4.6□□□□□ -1.67
PRPF40AO75400 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF40AO75400 MRPL49P2-201ENST00000521066 465 ntBASIC4.6□□□□□ -1.67
PRPF40AO75400 AP004607.1-201ENST00000524456 203 ntBASIC4.6□□□□□ -1.67
PRPF40AO75400 MIR4503-201ENST00000582187 83 ntBASIC4.6□□□□□ -1.67
PRPF40AO75400 MIR3149-201ENST00000584629 83 ntBASIC4.6□□□□□ -1.67
PRPF40AO75400 MIR5684-201ENST00000585074 65 ntBASIC4.6□□□□□ -1.67
PRPF40AO75400 AC008962.1-201ENST00000605729 304 ntBASIC4.6□□□□□ -1.67
PRPF40AO75400 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
PRPF40AO75400 AC048347.1-201ENST00000624621 427 ntBASIC4.6□□□□□ -1.67
PRPF40AO75400 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF40AO75400 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF40AO75400 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF40AO75400 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF40AO75400 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF40AO75400 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF40AO75400 SRP72P2-201ENST00000344851 1979 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 MIR383-201ENST00000362257 73 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 Y_RNA.47-201ENST00000362697 108 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 RNU6-884P-201ENST00000363889 107 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 RNU6-336P-201ENST00000364891 107 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 RNU1-73P-201ENST00000383971 164 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 SNORA70C-201ENST00000384538 135 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.59□□□□□ -1.67
PRPF40AO75400 AC007098.1-201ENST00000420122 367 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 AC092423.1-201ENST00000430165 186 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 HMGB1P37-201ENST00000439613 609 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 AC112492.4-201ENST00000456549 352 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 RNA5SP246-201ENST00000458909 119 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 RPL23AP49-201ENST00000492925 468 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 NDUFB4P9-201ENST00000511646 388 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF40AO75400 AC144568.1-201ENST00000520139 137 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.59□□□□□ -1.67
PRPF40AO75400 AP003730.1-201ENST00000524605 285 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF40AO75400 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF40AO75400 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF40AO75400 AC005046.1-201ENST00000608515 625 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 AL713922.2-201ENST00000619384 716 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 MIR4272-201ENST00000635924 64 ntBASIC4.59□□□□□ -1.67
PRPF40AO75400 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF40AO75400 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PRPF40AO75400 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF40AO75400 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
PRPF40AO75400 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms