Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 MIR548AI-201ENST00000579940 88 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 AC008121.1-201ENST00000603244 268 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 AL391261.4-201ENST00000616012 481 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 AC084757.4-201ENST00000616350 526 ntBASIC5.09□□□□□ -1.59
PTCD1O75127 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.09□□□□□ -1.59
PTCD1O75127 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.09□□□□□ -1.59
PTCD1O75127 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
PTCD1O75127 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PTCD1O75127 ZNF299P-201ENST00000406845 1804 ntBASIC5.09□□□□□ -1.6
PTCD1O75127 AC010266.2-201ENST00000564741 3255 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTCD1O75127 Z73965.1-201ENST00000623412 2297 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PTCD1O75127 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTCD1O75127 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PTCD1O75127 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTCD1O75127 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCD1O75127 Y_RNA.551-201ENST00000384661 102 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 RNU6-700P-201ENST00000391043 107 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 RNU6-1140P-201ENST00000410517 106 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 RNA5SP296-201ENST00000410523 111 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 AC007560.1-201ENST00000426912 237 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 NDUFB1P2-201ENST00000449477 176 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCD1O75127 snoU13.4-201ENST00000458916 104 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 RPL23AP45-201ENST00000476406 468 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 AC098869.1-201ENST00000481627 292 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 HMGB1P22-201ENST00000505315 124 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCD1O75127 NDUFB4P9-201ENST00000511646 388 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 SNORA40.15-201ENST00000516884 107 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 AMZ2P1-203ENST00000565833 850 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCD1O75127 AC007179.3-201ENST00000604976 235 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 AC006023.2-201ENST00000609916 167 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 MIR7702-201ENST00000621931 59 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCD1O75127 MTND5P9-201ENST00000503854 1755 ntBASIC5.08□□□□□ -1.6
PTCD1O75127 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.08□□□□□ -1.6
PTCD1O75127 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCD1O75127 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTCD1O75127 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PTCD1O75127 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTCD1O75127 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PTCD1O75127 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PTCD1O75127 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PTCD1O75127 RNU4-50P-201ENST00000364361 141 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 U1.1-201ENST00000384101 164 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCD1O75127 AL139247.1-201ENST00000422768 325 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.07□□□□□ -1.6
PTCD1O75127 HMGN2P31-201ENST00000432430 273 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 AL159987.2-201ENST00000432754 307 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.07□□□□□ -1.6
PTCD1O75127 PIGFP3-201ENST00000441918 722 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 TMSB4XP3-201ENST00000445144 114 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 FCF1P4-201ENST00000448326 183 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 RPL21P13-201ENST00000488305 481 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 AK3P2-201ENST00000507976 429 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 AC110768.1-201ENST00000509222 400 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.07□□□□□ -1.6
PTCD1O75127 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.07□□□□□ -1.6
PTCD1O75127 AC004024.1-201ENST00000549244 247 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.07□□□□□ -1.6
PTCD1O75127 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCD1O75127 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.07□□□□□ -1.6
PTCD1O75127 RPS29P30-201ENST00000600975 111 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.07□□□□□ -1.6
PTCD1O75127 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.07□□□□□ -1.6
PTCD1O75127 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTCD1O75127 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTCD1O75127 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTCD1O75127 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
PTCD1O75127 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTCD1O75127 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PTCD1O75127 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCD1O75127 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
PTCD1O75127 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
PTCD1O75127 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCD1O75127 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.06□□□□□ -1.6
PTCD1O75127 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PTCD1O75127 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCD1O75127 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCD1O75127 AC116096.1-201ENST00000566804 2314 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PTCD1O75127 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
PTCD1O75127 SNORA69.1-201ENST00000390904 137 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 MIR1290-201ENST00000408735 78 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 AL451074.5-201ENST00000415894 435 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 AL627311.1-201ENST00000431514 115 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCD1O75127 RPL23AP22-201ENST00000437556 453 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCD1O75127 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.06□□□□□ -1.6
PTCD1O75127 AC139453.3-201ENST00000493276 369 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.06□□□□□ -1.6
PTCD1O75127 RNA5SP291-201ENST00000517222 105 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 AC073410.2-201ENST00000603240 332 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 MIR8076-201ENST00000611401 83 ntBASIC5.06□□□□□ -1.6
PTCD1O75127 AL161629.2-201ENST00000615347 275 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms