Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.79□□□□□ -1.96
TO15178 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.79□□□□□ -1.96
TO15178 MIR3199-2-201ENST00000636243 86 ntBASIC2.79□□□□□ -1.96
TO15178 MIR1321-201ENST00000637766 79 ntBASIC2.79□□□□□ -1.96
TO15178 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.79□□□□□ -1.96
TO15178 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
TO15178 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
TO15178 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.79□□□□□ -1.96
TO15178 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.78□□□□□ -1.96
TO15178 ASNSP3-201ENST00000451989 1306 ntBASIC2.78□□□□□ -1.96
TO15178 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.78□□□□□ -1.96
TO15178 MIR422A-201ENST00000362286 90 ntBASIC2.78□□□□□ -1.96
TO15178 Y_RNA.402-201ENST00000383972 102 ntBASIC2.78□□□□□ -1.96
TO15178 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.78□□□□□ -1.96
TO15178 CIR1P3-201ENST00000405137 479 ntBASIC2.78□□□□□ -1.96
TO15178 AL606923.1-201ENST00000406616 190 ntBASIC2.78□□□□□ -1.96
TO15178 AC245054.2-201ENST00000415639 319 ntBASIC2.78□□□□□ -1.96
TO15178 USP9YP27-201ENST00000418455 438 ntBASIC2.78□□□□□ -1.96
TO15178 RPS3AP44-201ENST00000425466 790 ntBASIC2.78□□□□□ -1.96
TO15178 USP9YP18-201ENST00000425912 695 ntBASIC2.78□□□□□ -1.96
TO15178 AC000111.3-201ENST00000433478 193 ntBASIC2.78□□□□□ -1.96
TO15178 RPS15AP5-201ENST00000436276 388 ntBASIC2.78□□□□□ -1.96
TO15178 SEPT14P3-201ENST00000439401 183 ntBASIC2.78□□□□□ -1.96
TO15178 RPS3AP12-201ENST00000443616 753 ntBASIC2.78□□□□□ -1.96
TO15178 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.78□□□□□ -1.96
TO15178 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.78□□□□□ -1.96
TO15178 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.78□□□□□ -1.96
TO15178 AL732372.2-207ENST00000445840 183 ntBASIC2.78□□□□□ -1.96
TO15178 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.78□□□□□ -1.96
TO15178 UQCRHP3-201ENST00000451503 251 ntBASIC2.78□□□□□ -1.96
TO15178 SEPT14P2-201ENST00000453405 183 ntBASIC2.78□□□□□ -1.96
TO15178 AC117440.1-201ENST00000474107 571 ntBASIC2.78□□□□□ -1.96
TO15178 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.78□□□□□ -1.96
TO15178 AIG1P1-201ENST00000503376 148 ntBASIC2.78□□□□□ -1.96
TO15178 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.78□□□□□ -1.96
TO15178 SEPT14P4-201ENST00000513445 186 ntBASIC2.78□□□□□ -1.96
TO15178 RNU6-835P-201ENST00000516974 104 ntBASIC2.78□□□□□ -1.96
TO15178 FO082796.1-201ENST00000523795 183 ntBASIC2.78□□□□□ -1.96
TO15178 AK6P1-201ENST00000540219 478 ntBASIC2.78□□□□□ -1.96
TO15178 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.78□□□□□ -1.96
TO15178 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.78□□□□□ -1.96
TO15178 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.78□□□□□ -1.96
TO15178 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.78□□□□□ -1.96
TO15178 AC025281.1-201ENST00000567026 265 ntBASIC2.78□□□□□ -1.96
TO15178 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.78□□□□□ -1.96
TO15178 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.78□□□□□ -1.96
TO15178 AL645944.1-201ENST00000603857 493 ntBASIC2.78□□□□□ -1.96
TO15178 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.78□□□□□ -1.96
TO15178 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.78□□□□□ -1.96
TO15178 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.78□□□□□ -1.96
TO15178 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.78□□□□□ -1.96
TO15178 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.78□□□□□ -1.96
TO15178 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TO15178 AL354685.2-201ENST00000448218 1447 ntBASIC2.77□□□□□ -1.97
TO15178 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
TO15178 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TO15178 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.77□□□□□ -1.97
TO15178 RNY4P14-201ENST00000363656 96 ntBASIC2.77□□□□□ -1.97
TO15178 RNA5SP387-201ENST00000364226 106 ntBASIC2.77□□□□□ -1.97
TO15178 RNU6-715P-201ENST00000365204 103 ntBASIC2.77□□□□□ -1.97
TO15178 RNU4-12P-201ENST00000365233 139 ntBASIC2.77□□□□□ -1.97
TO15178 Y_RNA.333-201ENST00000365274 102 ntBASIC2.77□□□□□ -1.97
TO15178 SNORA9-201ENST00000384215 133 ntBASIC2.77□□□□□ -1.97
TO15178 RNU6-166P-201ENST00000384371 107 ntBASIC2.77□□□□□ -1.97
TO15178 RNU6-45P-201ENST00000384471 107 ntBASIC2.77□□□□□ -1.97
TO15178 RNU6-393P-201ENST00000384475 107 ntBASIC2.77□□□□□ -1.97
TO15178 SNORD37.1-201ENST00000390968 65 ntBASIC2.77□□□□□ -1.97
TO15178 AL138885.1-201ENST00000405921 675 ntBASIC2.77□□□□□ -1.97
TO15178 Y_RNA.623-201ENST00000411128 95 ntBASIC2.77□□□□□ -1.97
TO15178 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.77□□□□□ -1.97
TO15178 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.77□□□□□ -1.97
TO15178 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.77□□□□□ -1.97
TO15178 EIF1P1-201ENST00000421436 341 ntBASIC2.77□□□□□ -1.97
TO15178 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.77□□□□□ -1.97
TO15178 C8orf59P1-201ENST00000429930 303 ntBASIC2.77□□□□□ -1.97
TO15178 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.77□□□□□ -1.97
TO15178 MTND1P4-201ENST00000435196 415 ntBASIC2.77□□□□□ -1.97
TO15178 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.77□□□□□ -1.97
TO15178 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.77□□□□□ -1.97
TO15178 RPL39P40-201ENST00000445481 146 ntBASIC2.77□□□□□ -1.97
TO15178 AL360271.2-201ENST00000447710 161 ntBASIC2.77□□□□□ -1.97
TO15178 NDUFB1P2-201ENST00000449477 176 ntBASIC2.77□□□□□ -1.97
TO15178 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.77□□□□□ -1.97
TO15178 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.77□□□□□ -1.97
TO15178 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.77□□□□□ -1.97
TO15178 SCARNA18-201ENST00000459004 134 ntBASIC2.77□□□□□ -1.97
TO15178 RN7SL75P-201ENST00000461926 281 ntBASIC2.77□□□□□ -1.97
TO15178 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.77□□□□□ -1.97
TO15178 RNA5SP401-201ENST00000515920 127 ntBASIC2.77□□□□□ -1.97
TO15178 RN7SKP43-201ENST00000516173 320 ntBASIC2.77□□□□□ -1.97
TO15178 RN7SKP272-201ENST00000516988 232 ntBASIC2.77□□□□□ -1.97
TO15178 SNORA70.24-201ENST00000517233 118 ntBASIC2.77□□□□□ -1.97
TO15178 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.77□□□□□ -1.97
TO15178 AC109635.3-201ENST00000529536 185 ntBASIC2.77□□□□□ -1.97
TO15178 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TO15178 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.77□□□□□ -1.97
TO15178 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.77□□□□□ -1.97
TO15178 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.77□□□□□ -1.97
TO15178 LINC00933-203ENST00000559812 219 ntBASIC2.77□□□□□ -1.97
TO15178 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms