Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AK6P2-201ENST00000549020 471 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 MIR4643-201ENST00000577473 78 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 BPIFA4P-203ENST00000603168 689 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 MIR6134-201ENST00000617606 109 ntBASIC3.91□□□□□ -1.78
SHISA3A0PJX4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
SHISA3A0PJX4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
SHISA3A0PJX4 CPHL1P-201ENST00000461341 3407 ntBASIC3.9□□□□□ -1.78
SHISA3A0PJX4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SHISA3A0PJX4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.9□□□□□ -1.78
SHISA3A0PJX4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AL157777.2-201ENST00000258070 137 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 SNORD32A-201ENST00000364805 84 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 RNU6-898P-201ENST00000365627 104 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 RNU1-73P-201ENST00000383971 164 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 MIR493-201ENST00000385254 89 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 MIR937-201ENST00000401271 86 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AC017079.2-201ENST00000416102 485 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AC096638.1-201ENST00000444678 216 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 ABCF2P2-201ENST00000450549 296 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AC093270.2-201ENST00000486157 792 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AC025554.1-201ENST00000505641 188 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 PARP4P3-201ENST00000510265 317 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AC023141.12-201ENST00000512399 199 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 RN7SKP49-201ENST00000516675 260 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 RNU2-31P-201ENST00000516954 155 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 Z83818.1-201ENST00000603584 150 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 MIR432-201ENST00000606207 94 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SHISA3A0PJX4 AC018529.3-201ENST00000624212 2254 ntBASIC3.9□□□□□ -1.79
SHISA3A0PJX4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AC087190.4-201ENST00000574616 8334 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 RNU5B-2P-201ENST00000363036 113 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 SNORA29-201ENST00000384183 140 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 MIR888-201ENST00000401186 77 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 SNORD12B-201ENST00000410433 91 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 MIR1911-201ENST00000410783 80 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 RNA5SP306-201ENST00000411087 107 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AL390729.2-201ENST00000416137 156 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 RPL12P3-201ENST00000440080 396 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AC112498.1-201ENST00000444401 332 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 RPL7P49-201ENST00000471402 708 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 RPS26P15-201ENST00000488067 348 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 RN7SL808P-201ENST00000496066 299 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AC231760.1-201ENST00000498002 260 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AC097462.2-201ENST00000504623 481 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 RN7SKP147-201ENST00000517154 244 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 HSPE1P5-201ENST00000561489 272 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 MIR4423-201ENST00000580922 80 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AC012468.1-201ENST00000604888 430 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AL590392.1-201ENST00000604960 446 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AL023881.1-201ENST00000621088 301 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 OR14L1P-202ENST00000641545 3009 ntBASIC3.89□□□□□ -1.79
SHISA3A0PJX4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SHISA3A0PJX4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 OR56B2P-202ENST00000641377 2453 ntBASIC3.88□□□□□ -1.79
SHISA3A0PJX4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SHISA3A0PJX4 AC021146.4-201ENST00000309229 279 ntBASIC3.88□□□□□ -1.79
SHISA3A0PJX4 RNU6-1279P-201ENST00000383917 103 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms