Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AP001004.1-201ENST00000582468 324 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AC123912.5-201ENST00000605470 343 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AL359821.1-201ENST00000605519 182 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AC087045.1-201ENST00000605856 382 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AC106800.4-201ENST00000614905 153 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AC010133.1-201ENST00000615809 842 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AL136313.1-201ENST00000624804 202 ntBASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV12-3A0A0B4J271 AC092125.1-201ENST00000562568 1995 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 SNORD114-2-201ENST00000363953 78 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 SNORD1A-201ENST00000364968 72 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 Y_RNA.548-201ENST00000384656 105 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 MTCO2P31-201ENST00000402702 684 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 TPMTP3-201ENST00000411928 735 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 MTATP6P27-201ENST00000416987 621 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 CST2P1-201ENST00000425770 87 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 TPTE2P1-204ENST00000435256 593 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 RPS15AP9-201ENST00000439856 381 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AC002542.1-201ENST00000440683 193 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AC013267.1-201ENST00000458227 267 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 HMGN1P7-201ENST00000491722 313 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 ARL2BPP4-201ENST00000506854 471 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 PTP4A1P4-201ENST00000512479 322 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AC108729.3-201ENST00000513484 108 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-581P-201ENST00000516214 105 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 RNVU1-2-201ENST00000516326 135 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-678P-201ENST00000516832 109 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 SNORA31.17-201ENST00000516953 127 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 RNA5SP404-201ENST00000517118 132 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 MRPS36P5-201ENST00000551909 298 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 MIR4698-201ENST00000577795 80 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 NIFKP6-201ENST00000598115 845 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AC133794.1-201ENST00000602731 914 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AC091946.2-201ENST00000606105 291 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AL078604.3-201ENST00000615580 211 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 AL391516.1-201ENST00000554380 2449 ntBASIC0.63□□□□□ -2.31
TRAV12-3A0A0B4J271 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-658P-201ENST00000384606 106 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 MIR532-201ENST00000385025 91 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AL133264.1-201ENST00000407157 562 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC010153.1-201ENST00000432862 727 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC092001.1-201ENST00000453012 261 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 DUXAP8-207ENST00000456786 622 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC010409.1-201ENST00000487382 476 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC118282.2-201ENST00000508739 374 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 MTCO3P42-201ENST00000509488 518 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 TRMT112P2-201ENST00000512910 132 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 MTCO3P39-201ENST00000514812 518 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-991P-201ENST00000516168 107 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU7-40P-201ENST00000516397 64 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-586P-201ENST00000517265 104 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AP000763.2-201ENST00000540641 163 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AP005136.1-201ENST00000579765 429 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC073544.2-201ENST00000601155 540 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 CLIC4P2-201ENST00000601934 717 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 WISP1-OT1-201ENST00000602893 642 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AL132822.1-201ENST00000617063 513 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC106730.3-201ENST00000624568 641 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV12-3A0A0B4J271 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-839P-201ENST00000363347 108 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-392P-201ENST00000364926 101 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 MIR146A-201ENST00000385201 99 ntBASIC0.61□□□□□ -2.31
TRAV12-3A0A0B4J271 RNU6-796P-201ENST00000391086 107 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms