Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 SNORA73.1-201ENST00000363107 205 ntBASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 RNU6-640P-201ENST00000363693 105 ntBASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 RNU6-813P-201ENST00000384691 107 ntBASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 MIR607-201ENST00000385241 96 ntBASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 U3.32-201ENST00000408116 212 ntBASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 RN7SKP125-201ENST00000410481 302 ntBASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 AC068287.1-201ENST00000430283 295 ntBASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 AC006026.2-201ENST00000457376 180 ntBASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 RPS29P27-201ENST00000463711 170 ntBASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 RN7SL610P-201ENST00000463845 291 ntBASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 AC005046.1-201ENST00000608515 625 ntBASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 BX005214.3-202ENST00000619809 325 ntBASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
DNMT3AQ9Y6K1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
DNMT3AQ9Y6K1 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
DNMT3AQ9Y6K1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.9□□□□□ -1.62
DNMT3AQ9Y6K1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.9□□□□□ -1.62
DNMT3AQ9Y6K1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.9□□□□□ -1.62
DNMT3AQ9Y6K1 Y_RNA.35-201ENST00000362601 101 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 RNA5SP123-201ENST00000363244 119 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 SNORA58B-201ENST00000364259 136 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 RNU4-17P-201ENST00000365598 141 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 PPIAP31-201ENST00000405422 495 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 RPL21P40-201ENST00000428586 483 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 PSMD10P3-201ENST00000437000 448 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 RPL23AP3-201ENST00000453844 468 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 RPL31P13-201ENST00000484151 370 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 AC107027.2-201ENST00000512197 115 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 HMGB1P14-201ENST00000557424 591 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 AC090877.1-201ENST00000561418 344 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 MIR4782-201ENST00000577987 79 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 MIR4431-201ENST00000579990 94 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 AC087783.2-201ENST00000605070 562 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 AC106754.2-201ENST00000623006 233 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 snoU18.1-201ENST00000629629 71 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 AL731532.2-201ENST00000623542 1953 ntBASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
DNMT3AQ9Y6K1 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 AL513302.2-201ENST00000562313 1842 ntBASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 RN7SKP104-201ENST00000362605 328 ntBASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 RNU6-235P-201ENST00000362644 107 ntBASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 RPL7AP25-201ENST00000423357 805 ntBASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 RPL7AP61-201ENST00000443410 636 ntBASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 AC092991.1-201ENST00000477176 376 ntBASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 AC023424.1-201ENST00000496058 459 ntBASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 AC231760.1-201ENST00000498002 260 ntBASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 Y_RNA.797-201ENST00000515977 94 ntBASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 U6.99-201ENST00000637524 83 ntBASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
DNMT3AQ9Y6K1 A2MP1-204ENST00000566278 4130 ntBASIC4.88□□□□□ -1.63
DNMT3AQ9Y6K1 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
DNMT3AQ9Y6K1 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DNMT3AQ9Y6K1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
DNMT3AQ9Y6K1 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
DNMT3AQ9Y6K1 SNORA25.7-201ENST00000364375 127 ntBASIC4.88□□□□□ -1.63
DNMT3AQ9Y6K1 RNA5SP189-201ENST00000364920 115 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms