Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL355598.1-201ENST00000604169 202 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AP001836.1-201ENST00000604675 523 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AC012531.5-201ENST00000611375 151 ntBASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
PCDHB1Q9Y5F3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 FTLP6-201ENST00000355274 422 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 MIR369-201ENST00000362155 70 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 MIR34A-201ENST00000385130 110 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 UBE2V1P4-201ENST00000425374 344 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 AC098614.2-201ENST00000426040 255 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 RPS3AP52-201ENST00000435639 297 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 SNRPEP4-201ENST00000435815 279 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 MTND4P19-201ENST00000446659 478 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 RNA5SP310-201ENST00000459084 116 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 RNU6-559P-201ENST00000516151 98 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 SNORA31.19-201ENST00000517079 126 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 SYF2P1-201ENST00000550658 413 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 IMMP1LP2-201ENST00000552954 492 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 KLKP1-201ENST00000595979 403 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 APOOP1-201ENST00000604695 592 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 AC007938.3-201ENST00000604965 623 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 RNU6-85P-201ENST00000605989 107 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 AP000553.6-201ENST00000641242 118 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 AC007656.2-201ENST00000624902 4547 ntBASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PCDHB1Q9Y5F3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 MFSD8-236ENST00000641509 4050 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 RNU6-593P-201ENST00000364716 112 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 SNORA75B-201ENST00000384053 137 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 RNU6-474P-201ENST00000384243 107 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 Y_RNA.482-201ENST00000384377 111 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 SNORD116-29-201ENST00000384516 83 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AL391417.1-201ENST00000404100 426 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 ATG3P1-201ENST00000419507 911 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AC007560.1-201ENST00000426912 237 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 HMGB1P9-201ENST00000429856 646 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AL645568.3-201ENST00000433683 316 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 CYCSP32-201ENST00000440548 321 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AL078601.1-201ENST00000444542 271 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AL583843.1-201ENST00000456070 346 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 RPL23AP62-201ENST00000463396 453 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AC104472.2-201ENST00000469035 601 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AC096745.1-201ENST00000509945 370 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 RNU6-327P-201ENST00000516270 127 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 RNU6-572P-201ENST00000516724 80 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AC025423.5-201ENST00000550230 219 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AL670379.10-201ENST00000604330 253 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AL670379.9-201ENST00000605428 253 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AL162730.1-201ENST00000605734 292 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AL355365.1-201ENST00000616480 294 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 MIR6076-201ENST00000617521 113 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AC010378.1-201ENST00000619270 362 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AC119674.1-207ENST00000641355 633 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AF127577.6-201ENST00000623352 2191 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 AF117829.1-206ENST00000621883 3802 ntBASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.66□□□□□ -1.82
PCDHB1Q9Y5F3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PCDHB1Q9Y5F3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms