Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 Y_RNA.801-201ENST00000619005 101 ntBASIC4.31□□□□□ -1.72
R3HCC1Q9Y3T6 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
R3HCC1Q9Y3T6 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.31□□□□□ -1.72
R3HCC1Q9Y3T6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
R3HCC1Q9Y3T6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
R3HCC1Q9Y3T6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.31□□□□□ -1.72
R3HCC1Q9Y3T6 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 MTND5P19-201ENST00000424872 1794 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 CUL1P1-201ENST00000509510 2425 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 MIR372-201ENST00000362225 67 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 Y_RNA.216-201ENST00000364205 93 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 RNU6-658P-201ENST00000384606 106 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 MIR517A-201ENST00000385001 87 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 RNU6-328P-201ENST00000390887 106 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 MIR548P-201ENST00000408336 84 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 SNORA57.3-201ENST00000411095 141 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 AL030996.1-201ENST00000411430 235 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 Z99755.1-201ENST00000414048 380 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 Z82205.1-201ENST00000428456 297 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 AC236972.1-201ENST00000433225 199 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 AL031274.1-201ENST00000450334 232 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 AC018437.1-201ENST00000492214 406 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 AC006445.2-201ENST00000510061 472 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 AC108043.1-201ENST00000512696 574 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 Y_RNA.708-201ENST00000516950 96 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 RNA5SP179-201ENST00000517284 121 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 TRAV32-201ENST00000553993 340 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 MIR5047-201ENST00000579212 100 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 MIR3171-201ENST00000584270 74 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 SNRPGP17-201ENST00000603780 214 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 MIR6875-201ENST00000617506 72 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 AC007656.2-201ENST00000624902 4547 ntBASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
R3HCC1Q9Y3T6 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 AC007823.1-201ENST00000569932 1566 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 Y_RNA.128-201ENST00000363391 112 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 RNU6-1035P-201ENST00000384477 107 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 SNORA57.1-201ENST00000391227 145 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 AC097713.2-201ENST00000430199 356 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 FTH1P25-201ENST00000447665 469 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 AC097473.1-201ENST00000508142 408 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 RN7SKP21-201ENST00000516503 220 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 Y_RNA.687-201ENST00000516558 91 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 MIR3160-1-201ENST00000577972 85 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 MIR4782-201ENST00000577987 79 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 AC011494.1-201ENST00000596454 237 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 AC008121.1-201ENST00000603244 268 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 HSPE1P7-201ENST00000604681 321 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 AC091167.4-201ENST00000605079 184 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 AC019193.3-201ENST00000609144 554 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 RNA5SP196-201ENST00000625967 102 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 AC022336.2-201ENST00000568966 2538 ntBASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
R3HCC1Q9Y3T6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 Y_RNA.197-201ENST00000364004 102 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 Y_RNA.395-201ENST00000383945 109 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 RNU1-73P-201ENST00000383971 164 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 MIR34A-201ENST00000385130 110 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 RPS4XP3-201ENST00000398541 413 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 AL590004.1-201ENST00000405321 300 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 RNU6-325P-201ENST00000411132 105 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 RNA5SP31-201ENST00000411144 127 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 RNU6-293P-201ENST00000411259 106 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 SYF2P2-201ENST00000417620 583 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 RN7SL330P-201ENST00000469709 307 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 AC096576.1-201ENST00000489014 359 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 RPS29P20-201ENST00000489592 171 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 ELOCP31-201ENST00000540463 467 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 AC012468.1-201ENST00000604888 430 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 AL161629.2-201ENST00000615347 275 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 PISRT1.1-201ENST00000616930 107 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 AC092608.2-201ENST00000624427 218 ntBASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.28□□□□□ -1.72
R3HCC1Q9Y3T6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
R3HCC1Q9Y3T6 RNU6-827P-201ENST00000365553 106 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms