Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AL591034.3-201ENST00000605511 685 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 uc_338.13-201ENST00000618243 179 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.96□□□□□ -1.62
NOD1Q9Y239 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.96□□□□□ -1.62
NOD1Q9Y239 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NOD1Q9Y239 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NOD1Q9Y239 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NOD1Q9Y239 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NOD1Q9Y239 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NOD1Q9Y239 AC118273.1-201ENST00000525324 3006 ntBASIC4.95□□□□□ -1.62
NOD1Q9Y239 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
NOD1Q9Y239 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.95□□□□□ -1.62
NOD1Q9Y239 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NOD1Q9Y239 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NOD1Q9Y239 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NOD1Q9Y239 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NOD1Q9Y239 Y_RNA.44-201ENST00000362676 108 ntBASIC4.95□□□□□ -1.62
NOD1Q9Y239 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.95□□□□□ -1.62
NOD1Q9Y239 MIR153-2-201ENST00000385225 87 ntBASIC4.95□□□□□ -1.62
NOD1Q9Y239 SNORA53-201ENST00000391141 249 ntBASIC4.95□□□□□ -1.62
NOD1Q9Y239 AC104333.2-201ENST00000422630 192 ntBASIC4.95□□□□□ -1.62
NOD1Q9Y239 AC243964.1-201ENST00000441814 261 ntBASIC4.95□□□□□ -1.62
NOD1Q9Y239 AP000870.1-201ENST00000472927 406 ntBASIC4.95□□□□□ -1.62
NOD1Q9Y239 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.95□□□□□ -1.62
NOD1Q9Y239 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.95□□□□□ -1.62
NOD1Q9Y239 SNORA25.14-201ENST00000516481 132 ntBASIC4.95□□□□□ -1.62
NOD1Q9Y239 AP002392.1-201ENST00000537692 208 ntBASIC4.95□□□□□ -1.62
NOD1Q9Y239 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.95□□□□□ -1.62
NOD1Q9Y239 TVP23BP1-201ENST00000557500 617 ntBASIC4.95□□□□□ -1.62
NOD1Q9Y239 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NOD1Q9Y239 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NOD1Q9Y239 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
NOD1Q9Y239 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
NOD1Q9Y239 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NOD1Q9Y239 PCAT14-202ENST00000627127 3935 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.94□□□□□ -1.62
NOD1Q9Y239 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NOD1Q9Y239 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NOD1Q9Y239 HAUS6P2-201ENST00000433254 2404 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NOD1Q9Y239 MARK2P15-201ENST00000432204 2186 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 SPRR2C-201ENST00000290702 219 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 FTLP6-201ENST00000355274 422 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 MIR331-201ENST00000362302 94 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 Y_RNA.76-201ENST00000362931 109 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 RNU6-898P-201ENST00000365627 104 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.94□□□□□ -1.62
NOD1Q9Y239 AL359837.1-201ENST00000381357 287 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 MIR134-201ENST00000385258 73 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NOD1Q9Y239 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 RNU6-1245P-201ENST00000411130 106 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.94□□□□□ -1.62
NOD1Q9Y239 EIF4HP2-201ENST00000424380 563 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 AC005002.2-201ENST00000438228 269 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.94□□□□□ -1.62
NOD1Q9Y239 AL031659.1-201ENST00000447075 539 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 AC012671.1-201ENST00000451912 203 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 RNU7-120P-201ENST00000459334 63 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 RPL21P129-201ENST00000491732 478 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 AF186996.7-201ENST00000492781 209 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 AC107393.1-201ENST00000512403 346 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.94□□□□□ -1.62
NOD1Q9Y239 RNA5SP497-201ENST00000516081 97 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 RNU1-103P-201ENST00000516502 125 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 AC024405.2-202ENST00000532731 184 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.94□□□□□ -1.62
NOD1Q9Y239 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.94□□□□□ -1.62
NOD1Q9Y239 AC140479.6-201ENST00000633535 357 ntBASIC4.94□□□□□ -1.62
NOD1Q9Y239 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NOD1Q9Y239 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NOD1Q9Y239 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
NOD1Q9Y239 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
NOD1Q9Y239 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NOD1Q9Y239 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NOD1Q9Y239 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NOD1Q9Y239 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
NOD1Q9Y239 CPHL1P-201ENST00000461341 3407 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NOD1Q9Y239 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
NOD1Q9Y239 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.93□□□□□ -1.62
NOD1Q9Y239 RNU1-132P-201ENST00000364300 164 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 SNORA7.2-201ENST00000364446 145 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 RNU1-139P-201ENST00000391307 165 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 RPS4XP3-201ENST00000398541 413 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 RNA5SP317-201ENST00000410176 116 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 RNA5SP311-201ENST00000411290 116 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.93□□□□□ -1.62
NOD1Q9Y239 RPL21P66-201ENST00000426566 466 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.93□□□□□ -1.62
NOD1Q9Y239 AC087477.1-201ENST00000465747 340 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 RPL7P49-201ENST00000471402 708 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 SEPT14P8-201ENST00000508026 178 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 RNA5SP315-201ENST00000516340 116 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 RNA5SP312-201ENST00000517068 116 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 H3F3AP1-201ENST00000559984 334 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 MIR3133-201ENST00000583157 78 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 AC020895.1-201ENST00000595362 272 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 SNORD113-5-201ENST00000607261 78 ntBASIC4.93□□□□□ -1.62
NOD1Q9Y239 MIR92B-201ENST00000607575 96 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms