Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USP35Q9P2H5 AC074344.1-201ENST00000512823 224 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 RNU2-69P-201ENST00000516061 100 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 SNORD19.2-201ENST00000516978 73 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.5□□□□□ -1.69
USP35Q9P2H5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.5□□□□□ -1.69
USP35Q9P2H5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.5□□□□□ -1.69
USP35Q9P2H5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.5□□□□□ -1.69
USP35Q9P2H5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP35Q9P2H5 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.5□□□□□ -1.69
USP35Q9P2H5 CDC27P3-201ENST00000635418 1910 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.5□□□□□ -1.69
USP35Q9P2H5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.5□□□□□ -1.69
USP35Q9P2H5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
USP35Q9P2H5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
USP35Q9P2H5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 RNU6-82P-201ENST00000363970 107 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 RNU6-1090P-201ENST00000364065 94 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 Y_RNA.480-201ENST00000384364 102 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 MIR34A-201ENST00000385130 110 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 SNORA16.2-201ENST00000390991 127 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 SAR1AP2-201ENST00000392696 594 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 AC126124.2-201ENST00000413542 321 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 AL592148.1-201ENST00000413568 445 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 ARL5AP1-201ENST00000418991 388 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.49□□□□□ -1.69
USP35Q9P2H5 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.49□□□□□ -1.69
USP35Q9P2H5 FGF7P6-202ENST00000451282 293 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 AC011005.2-201ENST00000487324 359 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 RPS27P26-201ENST00000494583 239 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.49□□□□□ -1.69
USP35Q9P2H5 AC010265.1-201ENST00000513509 211 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 MIR892C-201ENST00000516410 77 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.49□□□□□ -1.69
USP35Q9P2H5 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.49□□□□□ -1.69
USP35Q9P2H5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.49□□□□□ -1.69
USP35Q9P2H5 AC005951.1-201ENST00000576706 485 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 AC005498.1-201ENST00000592125 465 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 AC012119.1-201ENST00000603184 222 ntBASIC4.49□□□□□ -1.69
USP35Q9P2H5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.49□□□□□ -1.69
USP35Q9P2H5 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.49□□□□□ -1.69
USP35Q9P2H5 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
USP35Q9P2H5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USP35Q9P2H5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
USP35Q9P2H5 SNORD3E-201ENST00000362899 217 ntBASIC4.48□□□□□ -1.69
USP35Q9P2H5 RNU1-140P-201ENST00000365040 165 ntBASIC4.48□□□□□ -1.69
USP35Q9P2H5 RNU6-750P-201ENST00000390946 107 ntBASIC4.48□□□□□ -1.69
USP35Q9P2H5 RNU4-47P-201ENST00000410876 114 ntBASIC4.48□□□□□ -1.69
USP35Q9P2H5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.48□□□□□ -1.69
USP35Q9P2H5 AC021205.2-201ENST00000480069 347 ntBASIC4.48□□□□□ -1.69
USP35Q9P2H5 MTND3P25-201ENST00000509243 135 ntBASIC4.48□□□□□ -1.69
USP35Q9P2H5 MTND4LP26-201ENST00000518144 282 ntBASIC4.48□□□□□ -1.69
USP35Q9P2H5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.48□□□□□ -1.69
USP35Q9P2H5 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.48□□□□□ -1.69
USP35Q9P2H5 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.48□□□□□ -1.69
USP35Q9P2H5 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
USP35Q9P2H5 AC006557.5-201ENST00000603126 811 ntBASIC4.48□□□□□ -1.69
USP35Q9P2H5 AL133393.1-201ENST00000603277 287 ntBASIC4.48□□□□□ -1.69
USP35Q9P2H5 AL732372.2-225ENST00000642124 456 ntBASIC4.48□□□□□ -1.69
USP35Q9P2H5 ADAM3A-203ENST00000461344 2157 ntBASIC4.48□□□□□ -1.69
USP35Q9P2H5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.48□□□□□ -1.69
USP35Q9P2H5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
USP35Q9P2H5 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.47□□□□□ -1.69
USP35Q9P2H5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP35Q9P2H5 MIR518D-201ENST00000385014 87 ntBASIC4.47□□□□□ -1.69
USP35Q9P2H5 SNORD115-47-201ENST00000391226 86 ntBASIC4.47□□□□□ -1.69
USP35Q9P2H5 MIR1277-201ENST00000408536 78 ntBASIC4.47□□□□□ -1.69
USP35Q9P2H5 RNU2-3P-201ENST00000410144 191 ntBASIC4.47□□□□□ -1.69
USP35Q9P2H5 AL645937.1-202ENST00000421799 937 ntBASIC4.47□□□□□ -1.69
USP35Q9P2H5 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.47□□□□□ -1.69
USP35Q9P2H5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.47□□□□□ -1.69
USP35Q9P2H5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.47□□□□□ -1.69
USP35Q9P2H5 PRPS1P1-201ENST00000445305 876 ntBASIC4.47□□□□□ -1.69
USP35Q9P2H5 RNU7-167P-201ENST00000459160 62 ntBASIC4.47□□□□□ -1.69
USP35Q9P2H5 MTND4LP22-201ENST00000508209 276 ntBASIC4.47□□□□□ -1.69
USP35Q9P2H5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.47□□□□□ -1.69
USP35Q9P2H5 MTND1P35-201ENST00000526739 508 ntBASIC4.47□□□□□ -1.69
USP35Q9P2H5 AP003400.5-201ENST00000624827 617 ntBASIC4.47□□□□□ -1.69
USP35Q9P2H5 AC092435.3-201ENST00000565538 3654 ntBASIC4.47□□□□□ -1.69
USP35Q9P2H5 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP35Q9P2H5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
USP35Q9P2H5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
USP35Q9P2H5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
USP35Q9P2H5 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP35Q9P2H5 RNU6-451P-201ENST00000362921 107 ntBASIC4.46□□□□□ -1.7
USP35Q9P2H5 Y_RNA.89-201ENST00000363031 102 ntBASIC4.46□□□□□ -1.7
USP35Q9P2H5 RNU6-384P-201ENST00000364900 104 ntBASIC4.46□□□□□ -1.7
USP35Q9P2H5 RNU6-38P-201ENST00000384085 107 ntBASIC4.46□□□□□ -1.7
USP35Q9P2H5 Y_RNA.453-201ENST00000384223 109 ntBASIC4.46□□□□□ -1.7
USP35Q9P2H5 MIR514A2-201ENST00000385131 88 ntBASIC4.46□□□□□ -1.7
USP35Q9P2H5 MIR514A3-201ENST00000385132 88 ntBASIC4.46□□□□□ -1.7
USP35Q9P2H5 SNORA48.8-201ENST00000391324 134 ntBASIC4.46□□□□□ -1.7
USP35Q9P2H5 BTF3P7-201ENST00000407097 488 ntBASIC4.46□□□□□ -1.7
USP35Q9P2H5 RN7SKP111-201ENST00000410349 271 ntBASIC4.46□□□□□ -1.7
USP35Q9P2H5 RNU6-1068P-201ENST00000410958 103 ntBASIC4.46□□□□□ -1.7
USP35Q9P2H5 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.46□□□□□ -1.7
USP35Q9P2H5 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.46□□□□□ -1.7
USP35Q9P2H5 MTATP6P13-201ENST00000438531 667 ntBASIC4.46□□□□□ -1.7
USP35Q9P2H5 AC107083.1-201ENST00000439643 279 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms