Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
NEUROD4Q9HD90 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
NEUROD4Q9HD90 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 SNURFL-201ENST00000309296 343 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 SNORD32A-201ENST00000364805 84 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 RNU6-741P-201ENST00000383889 107 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 RNU6-1027P-201ENST00000383998 107 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 MIR518D-201ENST00000385014 87 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 HLFP1-201ENST00000402375 499 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 BMS1P22-201ENST00000414726 313 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 SNRPEP9-201ENST00000436794 238 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 AC009237.8-201ENST00000445492 379 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 AC005868.1-201ENST00000536421 331 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 AC055872.1-201ENST00000570978 278 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 CYCSP40-201ENST00000575927 294 ntBASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.66□□□□□ -1.66
NEUROD4Q9HD90 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NEUROD4Q9HD90 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
NEUROD4Q9HD90 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NEUROD4Q9HD90 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
NEUROD4Q9HD90 MAPK10-263ENST00000641052 4307 ntBASIC4.65□□□□□ -1.66
NEUROD4Q9HD90 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.65□□□□□ -1.66
NEUROD4Q9HD90 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NEUROD4Q9HD90 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NEUROD4Q9HD90 RNU6-514P-201ENST00000384208 107 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 RNU6-22P-201ENST00000384355 107 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 MIR141-201ENST00000384975 95 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 AL078599.1-201ENST00000402075 293 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 RNU6-735P-201ENST00000410612 107 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 RNU2-51P-201ENST00000410708 197 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 RPL23AP26-201ENST00000412728 464 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 AC009220.1-201ENST00000451614 275 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 AURKAPS2-201ENST00000454983 333 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 BX284632.1-201ENST00000478218 541 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 RN7SL244P-201ENST00000493405 297 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 RNA5SP43-201ENST00000516559 110 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 RN7SKP147-201ENST00000517154 244 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 TRAV28-201ENST00000557548 323 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 MIR4330-201ENST00000579077 105 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 MIR3936-201ENST00000584304 110 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 FAM25E-202ENST00000608562 189 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 AL357075.2-201ENST00000614906 189 ntBASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
NEUROD4Q9HD90 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 RNU6-50P-201ENST00000362356 103 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 RNA5SP197-201ENST00000363357 119 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 Y_RNA.217-201ENST00000364214 105 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 RNU6-159P-201ENST00000391080 106 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 EIF1AXP1-201ENST00000419267 435 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 RPL36AP10-201ENST00000421785 322 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 AC245028.1-201ENST00000423259 256 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 CKS1BP6-201ENST00000424932 240 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 SETP5-201ENST00000437270 562 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 IFNA11P-201ENST00000446352 526 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 Y_RNA.641-201ENST00000459414 105 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 RNU6-1183P-201ENST00000517054 60 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 RNU6-58P-201ENST00000517143 103 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 AC136624.4-201ENST00000573044 370 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 AC091953.3-201ENST00000623220 236 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.64□□□□□ -1.67
NEUROD4Q9HD90 DHX9P1-201ENST00000436565 3076 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms