Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 RNU2-8P-201ENST00000410727 190 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 MTND1P23-201ENST00000416931 372 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 NUP35P1-201ENST00000422734 947 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AC236972.1-201ENST00000433225 199 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 RPL7P34-201ENST00000433316 712 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 RPS15AP28-201ENST00000435088 386 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AC104850.1-201ENST00000435940 476 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AL583843.1-201ENST00000456070 346 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 SNRPFP4-201ENST00000456366 242 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AC022493.1-201ENST00000492984 337 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 MIR4319-201ENST00000577285 85 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AL449363.1-201ENST00000617815 186 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AC138627.2-201ENST00000624202 601 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 AL603839.4-201ENST00000624658 1005 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.41□□□□□ -2.02
DDX47Q9H0S4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
DDX47Q9H0S4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
DDX47Q9H0S4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
DDX47Q9H0S4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
DDX47Q9H0S4 MIRLET7G-201ENST00000362280 84 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 RNU4-21P-201ENST00000362802 126 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 RNA5SP125-201ENST00000364843 120 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 SNORA20.2-201ENST00000383922 131 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 RNU6-641P-201ENST00000384006 107 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 CIR1P3-201ENST00000405137 479 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 RPS3AP3-201ENST00000411933 242 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.4□□□□□ -2.03
DDX47Q9H0S4 CYCSP48-201ENST00000417124 323 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AL160275.3-201ENST00000423876 471 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AL441985.1-201ENST00000457727 251 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AC104435.1-201ENST00000483483 166 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 SNORA25.11-201ENST00000515935 105 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 RNU6-123P-201ENST00000516163 102 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.4□□□□□ -2.03
DDX47Q9H0S4 ADI1P3-201ENST00000549509 470 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AC234778.2-201ENST00000566241 354 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
DDX47Q9H0S4 MIR3162-201ENST00000581818 82 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AL139286.2-201ENST00000606838 396 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 AC010378.1-201ENST00000619270 362 ntBASIC2.4□□□□□ -2.03
DDX47Q9H0S4 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.4□□□□□ -2.03
DDX47Q9H0S4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.4□□□□□ -2.03
DDX47Q9H0S4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.4□□□□□ -2.03
DDX47Q9H0S4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 SNORD3E-201ENST00000362899 217 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 Y_RNA.169-201ENST00000363745 96 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 MT-TH-201ENST00000387441 69 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 CISD1P1-201ENST00000393907 327 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AL031779.1-201ENST00000415663 330 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AC016831.2-201ENST00000417179 352 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AL031659.1-201ENST00000447075 539 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AC117522.1-201ENST00000509821 380 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AC119751.5-201ENST00000514077 770 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 SMURF2P1-201ENST00000514992 481 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 IGLV3-17-201ENST00000519099 244 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AC145350.1-201ENST00000567426 208 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AC025678.1-201ENST00000567861 338 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AC012213.3-201ENST00000577199 777 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AC103810.6-201ENST00000606708 136 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AC244517.12-201ENST00000623581 663 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 Z82209.1-201ENST00000422141 2135 ntBASIC2.39□□□□□ -2.03
DDX47Q9H0S4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.39□□□□□ -2.03
DDX47Q9H0S4 Z75746.1-201ENST00000440243 2080 ntBASIC2.38□□□□□ -2.03
DDX47Q9H0S4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.38□□□□□ -2.03
DDX47Q9H0S4 SNORA38-201ENST00000363946 132 ntBASIC2.38□□□□□ -2.03
DDX47Q9H0S4 RNU6-169P-201ENST00000365336 107 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms