Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 FAM27D1-201ENST00000612308 341 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AC083806.3-201ENST00000614016 455 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AC007792.1-201ENST00000623023 402 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 RNA5SP196-201ENST00000625967 102 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 AL732372.2-225ENST00000642124 456 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 RBBP8P1-201ENST00000449447 1844 ntBASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.76□□□□□ -1.65
TRAIPQ9BWF2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 MIR383-201ENST00000362257 73 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 RNU6-1115P-201ENST00000362490 106 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 RNA5SP307-201ENST00000362863 116 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 RNU6-784P-201ENST00000384330 106 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 Y_RNA.533-201ENST00000384596 114 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 RAC1P3-201ENST00000416129 580 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 AL137792.2-201ENST00000443484 235 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 RPS29P27-201ENST00000463711 170 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 RNU5B-3P-201ENST00000516601 115 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 MIR2116-201ENST00000517221 80 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 IGKV2-23-201ENST00000518729 323 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 AC010653.1-201ENST00000571108 881 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 AC016925.2-201ENST00000605108 242 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 RNU6-91P-201ENST00000607774 107 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 AC091905.2-201ENST00000623143 306 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 AC008669.1-201ENST00000565823 2178 ntBASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAIPQ9BWF2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 Y_RNA.28-201ENST00000362554 111 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 Y_RNA.162-201ENST00000363683 102 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 Y_RNA.252-201ENST00000364556 101 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 RNU1-63P-201ENST00000383902 164 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 AC007098.1-201ENST00000420122 367 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 AL157831.1-201ENST00000426134 473 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 AC017083.1-201ENST00000428093 483 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 SNORA31.9-201ENST00000516429 84 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 RNA5SP49-201ENST00000516450 115 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 RN7SKP295-201ENST00000517264 153 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 ELOCP31-201ENST00000540463 467 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 DNAJC8P1-201ENST00000554535 372 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 SUB1P3-201ENST00000564581 315 ntBASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRAIPQ9BWF2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 AC233981.2-201ENST00000611524 1614 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 MTND5P30-201ENST00000452896 1731 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 Y_RNA.126-201ENST00000363382 111 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 RNU6-799P-201ENST00000363567 107 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 RNU6-1027P-201ENST00000383998 107 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 RNU6-1222P-201ENST00000384615 107 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 Y_RNA.577-201ENST00000384794 101 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 RNU6-308P-201ENST00000390957 107 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 RNA5SP317-201ENST00000410176 116 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 RNA5SP311-201ENST00000411290 116 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 AL365496.1-201ENST00000426885 215 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 AC007969.2-201ENST00000441891 191 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 RPS26P28-201ENST00000470806 348 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 AC096576.1-201ENST00000489014 359 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 AC104564.1-201ENST00000493028 407 ntBASIC4.73□□□□□ -1.65
TRAIPQ9BWF2 AC093663.1-201ENST00000497190 394 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms