Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.09□□□□□ -2.07
PKNOX2Q96KN3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.09□□□□□ -2.07
PKNOX2Q96KN3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.09□□□□□ -2.07
PKNOX2Q96KN3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 RNA5SP289-201ENST00000362332 137 ntBASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 SNORA80A-201ENST00000363922 136 ntBASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 MIR29C-201ENST00000385231 88 ntBASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 AC078974.1-201ENST00000411597 223 ntBASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 RNU5A-4P-201ENST00000516588 111 ntBASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 AC005261.5-201ENST00000596280 355 ntBASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 AC092953.2-201ENST00000608000 699 ntBASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PKNOX2Q96KN3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 U3.12-201ENST00000364498 214 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 MIR150-201ENST00000385048 84 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 AC097463.2-201ENST00000421074 142 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 HMGB1P27-201ENST00000431429 603 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 TIMM9P1-201ENST00000436122 256 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 FABP5P13-201ENST00000452144 328 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 SCARNA1-201ENST00000517138 166 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 AP006587.4-201ENST00000526053 529 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 RANP3-201ENST00000530970 276 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 AC007375.1-201ENST00000554513 578 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 AL354943.1-201ENST00000572103 781 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 PRR13P7-201ENST00000605538 430 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 AC116312.1-201ENST00000606841 314 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 AC008121.3-201ENST00000618726 433 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 MTND5P10-201ENST00000603719 1809 ntBASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
PKNOX2Q96KN3 AC006020.1-201ENST00000420179 1854 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 NACAP2-201ENST00000318548 624 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 RNY4P24-201ENST00000362735 96 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 SNORA67.3-201ENST00000384366 140 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 RNU6-658P-201ENST00000384606 106 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 RNU6-14P-201ENST00000384630 106 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 SSR1P2-201ENST00000415208 787 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AL161651.1-201ENST00000440882 223 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 CR769776.1-201ENST00000441254 787 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AL137159.1-201ENST00000452808 512 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 KATNBL1P6-201ENST00000453433 915 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AC126389.1-201ENST00000477436 290 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 HSPE1P23-201ENST00000509838 286 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 RPS3AP4-201ENST00000555161 764 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 MIR3167-201ENST00000579623 85 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 MIR4307-201ENST00000582802 84 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AC016925.2-201ENST00000605108 242 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AC092106.3-201ENST00000611308 722 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AC090970.3-201ENST00000612566 866 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 AC022202.1-201ENST00000613515 211 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 MTND4P16-201ENST00000466108 1367 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 ZNF876P-202ENST00000398732 1485 ntBASIC2.06□□□□□ -2.08
PKNOX2Q96KN3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 MIR513B-201ENST00000385136 84 ntBASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 AC009310.1-201ENST00000414414 451 ntBASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 UBE2V1P4-201ENST00000425374 344 ntBASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 AC139453.3-201ENST00000493276 369 ntBASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 AC114801.2-201ENST00000503825 781 ntBASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.05□□□□□ -2.08
PKNOX2Q96KN3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms