Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 MTND4P17-201ENST00000470444 350 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 RPL7P43-201ENST00000478876 753 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 AC078817.1-201ENST00000492623 435 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 SCARNA15.2-201ENST00000516409 127 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 NDUFB9P3-201ENST00000521269 501 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.15□□□□□ -1.75
RTF1Q92541 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.15□□□□□ -1.75
RTF1Q92541 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.15□□□□□ -1.75
RTF1Q92541 MED28P6-201ENST00000558776 231 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.15□□□□□ -1.75
RTF1Q92541 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.15□□□□□ -1.75
RTF1Q92541 UBL5P2-201ENST00000583788 219 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 MIR3672-201ENST00000584290 82 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 AC023043.2-201ENST00000589678 1026 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.15□□□□□ -1.75
RTF1Q92541 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.15□□□□□ -1.75
RTF1Q92541 AC099506.2-201ENST00000623074 221 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RTF1Q92541 AC007496.3-201ENST00000624987 3443 ntBASIC4.15□□□□□ -1.75
RTF1Q92541 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.15□□□□□ -1.75
RTF1Q92541 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
RTF1Q92541 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.14□□□□□ -1.75
RTF1Q92541 RNU6-1252P-201ENST00000363054 104 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 SNORA63-201ENST00000363450 132 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.14□□□□□ -1.75
RTF1Q92541 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.14□□□□□ -1.75
RTF1Q92541 RNU6-1297P-201ENST00000384415 104 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 Y_RNA.534-201ENST00000384599 112 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 snosnR66.1-201ENST00000391095 99 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 AL139397.2-201ENST00000404529 772 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 MIR1290-201ENST00000408735 78 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 RN7SKP158-201ENST00000410453 326 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 AC074085.1-201ENST00000413598 418 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 RPL23AP69-201ENST00000431134 458 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 AL049874.1-201ENST00000489560 388 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RTF1Q92541 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RTF1Q92541 AL359273.1-201ENST00000510918 627 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.14□□□□□ -1.75
RTF1Q92541 RPL39P5-202ENST00000512505 151 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RTF1Q92541 RNU6-1069P-201ENST00000516612 133 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 RNU6-914P-201ENST00000516749 109 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 RNA5SP454-201ENST00000517231 127 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.14□□□□□ -1.75
RTF1Q92541 CYCSP27-201ENST00000527643 293 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 AP004242.1-201ENST00000533701 349 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 ATP1B3P1-201ENST00000605365 821 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 DUSP12P1-201ENST00000612874 516 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 AC126177.8-201ENST00000618339 1015 ntBASIC4.14□□□□□ -1.75
RTF1Q92541 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.14□□□□□ -1.75
RTF1Q92541 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.14□□□□□ -1.75
RTF1Q92541 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.14□□□□□ -1.75
RTF1Q92541 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RTF1Q92541 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
RTF1Q92541 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RTF1Q92541 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RTF1Q92541 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RTF1Q92541 AP001148.1-201ENST00000624124 2359 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.13□□□□□ -1.75
RTF1Q92541 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTF1Q92541 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTF1Q92541 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RTF1Q92541 OR4G2P-202ENST00000641004 1759 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 RNU6-371P-201ENST00000364283 108 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 AL360182.1-201ENST00000397433 468 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 AL138885.1-201ENST00000405921 675 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 MTCO2P27-201ENST00000420740 428 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 AL139396.1-201ENST00000421137 167 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 RPS3AP52-201ENST00000435639 297 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 AL118496.2-201ENST00000448300 230 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.13□□□□□ -1.75
RTF1Q92541 RPL21P41-201ENST00000459863 264 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 S100A11P2-201ENST00000467589 312 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 RPL31P60-201ENST00000478450 367 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 AC078918.1-201ENST00000498515 228 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 AC079140.5-201ENST00000507882 310 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.13□□□□□ -1.75
RTF1Q92541 RNU6-559P-201ENST00000516151 98 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.13□□□□□ -1.75
RTF1Q92541 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.13□□□□□ -1.75
RTF1Q92541 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.13□□□□□ -1.75
RTF1Q92541 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.13□□□□□ -1.75
RTF1Q92541 MIR5047-201ENST00000579212 100 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 AC011471.1-201ENST00000585766 187 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 AP001330.4-201ENST00000604350 154 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 APOOP1-201ENST00000604695 592 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 AC107294.1-201ENST00000609524 467 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 AC091903.1-201ENST00000624322 454 ntBASIC4.13□□□□□ -1.75
RTF1Q92541 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC4.13□□□□□ -1.75
RTF1Q92541 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
RTF1Q92541 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.12□□□□□ -1.75
RTF1Q92541 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.12□□□□□ -1.75
RTF1Q92541 Y_RNA.135-201ENST00000363439 95 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 Y_RNA.259-201ENST00000364619 101 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 Y_RNA.394-201ENST00000383942 103 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 RNU6-45P-201ENST00000384471 107 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 SNORD15B-201ENST00000384714 146 ntBASIC4.12□□□□□ -1.75
RTF1Q92541 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RTF1Q92541 MIR450B-201ENST00000401182 78 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms