Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.45□□□□□ -1.7
SHKBP1Q8TBC3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-37P-201ENST00000362692 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-11P-201ENST00000364234 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.275-201ENST00000364726 110 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-7-201ENST00000364784 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-8-201ENST00000365467 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-827P-201ENST00000365553 106 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-25P-201ENST00000383873 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-1-201ENST00000383898 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.435-201ENST00000384095 112 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.441-201ENST00000384123 112 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-36P-201ENST00000384172 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-4P-201ENST00000384205 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-5P-201ENST00000384238 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-3P-201ENST00000384314 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-16P-201ENST00000384385 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-15P-201ENST00000384534 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 SNORD20-201ENST00000384550 80 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-2-201ENST00000384627 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-29P-201ENST00000384637 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-9-201ENST00000384776 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.590-201ENST00000410140 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU2-61P-201ENST00000411069 191 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 SNORD56-201ENST00000413522 71 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 MTCO1P5-201ENST00000433573 344 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 AL162151.2-201ENST00000448875 158 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 SNORA84-201ENST00000459229 133 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.638-201ENST00000459374 113 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 AC010469.1-201ENST00000463864 576 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RN7SKP277-201ENST00000516895 283 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 TRAV37-201ENST00000553906 342 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RPL23AP78-201ENST00000599928 470 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-6P-201ENST00000606623 107 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 SDAD1P2-201ENST00000441308 2028 ntBASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.44□□□□□ -1.7
SHKBP1Q8TBC3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-1301P-201ENST00000362724 104 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.82-201ENST00000363000 102 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.92-201ENST00000363043 102 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 RNU6-1155P-201ENST00000363554 107 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.235-201ENST00000364412 102 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.286-201ENST00000364813 102 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.306-201ENST00000365015 102 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.312-201ENST00000365089 102 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.322-201ENST00000365151 102 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.497-201ENST00000384447 98 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 RPL21P65-201ENST00000406094 466 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 SSXP9-201ENST00000417503 292 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 AL358453.1-201ENST00000422522 250 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 AL451062.2-201ENST00000427515 271 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.650-201ENST00000459002 102 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 RPS15AP34-201ENST00000487776 387 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 RPL21P129-201ENST00000491732 478 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.679-201ENST00000516416 91 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.706-201ENST00000516933 99 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.777-201ENST00000516982 102 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 H3F3AP1-201ENST00000559984 334 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 FAM60BP-201ENST00000578364 658 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.771-201ENST00000598668 102 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 AL139395.1-201ENST00000603662 160 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 Y_RNA.789-201ENST00000622480 102 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 MIR4275-201ENST00000636486 87 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 RBBP8P1-201ENST00000449447 1844 ntBASIC4.43□□□□□ -1.7
SHKBP1Q8TBC3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms