Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 SNORA80A-201ENST00000363922 136 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 RNU6-790P-201ENST00000384479 105 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 MIR578-201ENST00000384828 96 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AL445529.1-201ENST00000398713 389 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 BX276092.3-201ENST00000424182 230 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AL589765.3-201ENST00000446084 462 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AL360271.2-201ENST00000447710 161 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AL031274.1-201ENST00000450334 232 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AP000942.1-201ENST00000463969 747 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AC011005.2-201ENST00000487324 359 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AC107222.1-201ENST00000510899 637 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 RNY3P15-201ENST00000516297 97 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 Vault.1-201ENST00000516474 102 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 MIR4276-201ENST00000584832 70 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 MIR548AC-201ENST00000585049 88 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 HMGN2P28-201ENST00000606102 262 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AL021879.1-201ENST00000611756 288 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AP001273.1-201ENST00000624493 3152 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AL450326.2-201ENST00000421913 1962 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 AC083843.3-201ENST00000623679 2186 ntBASIC4.43□□□□□ -1.7
LINC00116Q8NCU8 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 LINC02471-203ENST00000641941 4752 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 RNU1-108P-201ENST00000362556 161 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 Y_RNA.106-201ENST00000363189 100 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 SNORD14.1-201ENST00000365609 90 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 Y_RNA.489-201ENST00000384410 101 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 RN7SKP111-201ENST00000410349 271 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 AC063979.1-201ENST00000415539 377 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 RPS15AP6-201ENST00000420703 385 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 AL353997.1-201ENST00000432936 108 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 DYNLT3P2-201ENST00000442517 295 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 OSTCP8-201ENST00000445117 448 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 RPL23AP31-201ENST00000456160 467 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 RPS23P3-201ENST00000470993 430 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 AC108860.1-201ENST00000484521 383 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 RPS15AP34-201ENST00000487776 387 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 RPL17P19-201ENST00000489069 552 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 AL162274.2-201ENST00000614406 332 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 HMGB1P24-202ENST00000615653 685 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 SNORD39.4-201ENST00000620099 78 ntBASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
LINC00116Q8NCU8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 Y_RNA.48-201ENST00000362710 103 ntBASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 DEFB109C-201ENST00000382575 264 ntBASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 DEFB109B-201ENST00000382656 264 ntBASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 Y_RNA.396-201ENST00000383949 103 ntBASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 MIR513A2-201ENST00000385249 127 ntBASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 AL133396.1-201ENST00000432048 687 ntBASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 RPS15AP10-201ENST00000432472 382 ntBASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 RPL21P2-201ENST00000440049 481 ntBASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 RNU6-579P-201ENST00000516879 102 ntBASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 MIR3124-201ENST00000582636 67 ntBASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 MIR4273-201ENST00000582824 84 ntBASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 Z98751.3-201ENST00000604447 521 ntBASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
LINC00116Q8NCU8 ZNF72P-201ENST00000425869 1908 ntBASIC4.4□□□□□ -1.7
LINC00116Q8NCU8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
LINC00116Q8NCU8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
LINC00116Q8NCU8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
LINC00116Q8NCU8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
LINC00116Q8NCU8 Z83843.1-201ENST00000604070 3685 ntBASIC4.4□□□□□ -1.7
LINC00116Q8NCU8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LINC00116Q8NCU8 AC090971.4-201ENST00000560291 1800 ntBASIC4.4□□□□□ -1.7
LINC00116Q8NCU8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
LINC00116Q8NCU8 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.7
LINC00116Q8NCU8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms