Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX5Q8N196 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SIX5Q8N196 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SIX5Q8N196 SRP72P2-201ENST00000344851 1979 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX5Q8N196 RNU6-50P-201ENST00000362356 103 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 Z98749.2-208ENST00000381646 500 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 RNU6-378P-201ENST00000384324 107 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 RNU6-21P-201ENST00000384710 107 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 RNU1-139P-201ENST00000391307 165 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 RNA5SP241-201ENST00000391326 114 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 RPS26P8-201ENST00000393490 348 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 RPS4XP3-201ENST00000398541 413 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 NDUFB4P6-201ENST00000436819 366 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.84□□□□□ -1.63
SIX5Q8N196 RPL23AP14-201ENST00000468281 468 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 SNRPGP7-201ENST00000469016 106 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 RPL21P126-201ENST00000470049 478 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 SEPT14P8-201ENST00000508026 178 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 SNORA25.14-201ENST00000516481 132 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 RN7SL290P-201ENST00000578661 300 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 IPO5P1-202ENST00000600039 287 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 SNORD113-5-201ENST00000607261 78 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX5Q8N196 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SIX5Q8N196 AL592182.3-201ENST00000642132 3304 ntBASIC4.84□□□□□ -1.63
SIX5Q8N196 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SIX5Q8N196 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.84□□□□□ -1.63
SIX5Q8N196 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SIX5Q8N196 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SIX5Q8N196 TLK1P1-201ENST00000456760 2440 ntBASIC4.84□□□□□ -1.64
SIX5Q8N196 ZNF137P-201ENST00000456718 1920 ntBASIC4.84□□□□□ -1.64
SIX5Q8N196 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SIX5Q8N196 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SIX5Q8N196 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SIX5Q8N196 Y_RNA.44-201ENST00000362676 108 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 RNU1-140P-201ENST00000365040 165 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 RNU1-73P-201ENST00000383971 164 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 RNU6-217P-201ENST00000384164 104 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 SNORA48.4-201ENST00000391089 134 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 SNORD12B-201ENST00000410433 91 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 AL356387.2-201ENST00000422272 243 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 AL645608.4-201ENST00000423619 154 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 EIF1P2-201ENST00000428233 350 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.83□□□□□ -1.64
SIX5Q8N196 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.83□□□□□ -1.64
SIX5Q8N196 HSPE1P25-201ENST00000455484 251 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.83□□□□□ -1.64
SIX5Q8N196 SNORA74C-1-201ENST00000580726 201 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 AL445567.2-201ENST00000618935 498 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SIX5Q8N196 AC022336.2-201ENST00000568966 2538 ntBASIC4.83□□□□□ -1.64
SIX5Q8N196 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SIX5Q8N196 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SIX5Q8N196 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.82□□□□□ -1.64
SIX5Q8N196 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX5Q8N196 ZNF826P-207ENST00000622273 1910 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX5Q8N196 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SIX5Q8N196 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX5Q8N196 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SIX5Q8N196 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SIX5Q8N196 RNU6-858P-201ENST00000362436 107 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 SNORD56.1-201ENST00000362913 68 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 MIR518D-201ENST00000385014 87 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 RNU5A-5P-201ENST00000411054 116 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 RPS20P14-201ENST00000412545 360 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 RPL7AP25-201ENST00000423357 805 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 AC005002.2-201ENST00000438228 269 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 AL392103.1-201ENST00000447000 198 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 AL031659.1-201ENST00000447075 539 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 HMGB3P8-201ENST00000449709 577 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 RPS17P2-201ENST00000461663 408 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.82□□□□□ -1.64
SIX5Q8N196 AF186996.7-201ENST00000492781 209 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.82□□□□□ -1.64
SIX5Q8N196 AC024405.2-202ENST00000532731 184 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 AP002392.1-201ENST00000537692 208 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.82□□□□□ -1.64
SIX5Q8N196 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX5Q8N196 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.82□□□□□ -1.64
SIX5Q8N196 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.82□□□□□ -1.64
SIX5Q8N196 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.82□□□□□ -1.64
SIX5Q8N196 HSPE1P5-201ENST00000561489 272 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 RN7SL435P-201ENST00000584418 282 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 AC019159.1-201ENST00000605094 187 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.82□□□□□ -1.64
SIX5Q8N196 AC005296.1-201ENST00000616145 209 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 AC127459.3-201ENST00000624328 466 ntBASIC4.82□□□□□ -1.64
SIX5Q8N196 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX5Q8N196 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SIX5Q8N196 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX5Q8N196 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX5Q8N196 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.82□□□□□ -1.64
SIX5Q8N196 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SIX5Q8N196 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SIX5Q8N196 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIX5Q8N196 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
SIX5Q8N196 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms