Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RPL23AP3-201ENST00000453844 468 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 snoU13.30-201ENST00000458951 104 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RPS4XP22-201ENST00000480755 780 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 HMGB3P3-201ENST00000510526 400 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RNA5SP497-201ENST00000516081 97 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RNU6-1333P-201ENST00000516162 93 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 AC100770.1-201ENST00000532310 322 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RPL23AP97-201ENST00000568955 471 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 MIR4277-201ENST00000578298 84 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 AC008121.1-201ENST00000603244 268 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RPL23AP88-201ENST00000605759 454 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 AL360181.4-201ENST00000621752 134 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 AC007546.2-201ENST00000623996 360 ntBASIC4.05□□□□□ -1.76
ATG4DQ86TL0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.05□□□□□ -1.76
ATG4DQ86TL0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 AC018529.3-201ENST00000624212 2254 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 RNA5SP361-201ENST00000362686 118 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 RNU6-151P-201ENST00000364158 107 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 Y_RNA.218-201ENST00000364218 104 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 RNU4-56P-201ENST00000364700 142 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 RNU6-76P-201ENST00000384060 104 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 MIR129-1-201ENST00000384972 72 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 MIR301A-201ENST00000385261 86 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 SNORD12B-201ENST00000410433 91 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 RNU6-603P-201ENST00000411403 107 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 AL158156.1-201ENST00000422509 473 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 AL358472.1-201ENST00000431295 329 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 AC010409.1-201ENST00000487382 476 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 AL160314.1-201ENST00000490836 438 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 RNU6-971P-201ENST00000516920 106 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 MIR4423-201ENST00000580922 80 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 MIR4697-201ENST00000582977 78 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 AL160290.3-201ENST00000604869 165 ntBASIC4.04□□□□□ -1.76
ATG4DQ86TL0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.04□□□□□ -1.76
ATG4DQ86TL0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 RNA5SP447-201ENST00000363749 119 ntBASIC4.03□□□□□ -1.76
ATG4DQ86TL0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 Y_RNA.571-201ENST00000384753 98 ntBASIC4.03□□□□□ -1.76
ATG4DQ86TL0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 RPL23AP26-201ENST00000412728 464 ntBASIC4.03□□□□□ -1.76
ATG4DQ86TL0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 TOMM20P4-201ENST00000427861 435 ntBASIC4.03□□□□□ -1.76
ATG4DQ86TL0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 RNU6-927P-201ENST00000516199 100 ntBASIC4.03□□□□□ -1.76
ATG4DQ86TL0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 AK6P2-201ENST00000549020 471 ntBASIC4.03□□□□□ -1.76
ATG4DQ86TL0 AC005476.1-201ENST00000554427 397 ntBASIC4.03□□□□□ -1.76
ATG4DQ86TL0 KLKP1-201ENST00000595979 403 ntBASIC4.03□□□□□ -1.76
ATG4DQ86TL0 AL139395.1-201ENST00000603662 160 ntBASIC4.03□□□□□ -1.76
ATG4DQ86TL0 AC005046.1-201ENST00000608515 625 ntBASIC4.03□□□□□ -1.76
ATG4DQ86TL0 AC023043.4-201ENST00000612081 449 ntBASIC4.03□□□□□ -1.76
ATG4DQ86TL0 MIR4275-201ENST00000636486 87 ntBASIC4.03□□□□□ -1.76
ATG4DQ86TL0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ATG4DQ86TL0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.02□□□□□ -1.77
ATG4DQ86TL0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms