Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 DEFB108F-201ENST00000344638 222 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 SNORD62.1-201ENST00000362541 86 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 RNU6-283P-201ENST00000364788 107 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 Y_RNA.404-201ENST00000383978 102 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 RNU6-1179P-201ENST00000384667 107 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC4.09□□□□□ -1.75
HERVK_113P62684 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.09□□□□□ -1.75
HERVK_113P62684 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.09□□□□□ -1.75
HERVK_113P62684 HMGB1P9-201ENST00000429856 646 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 AL160004.2-201ENST00000432935 350 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 SNRPGP5-201ENST00000456003 220 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.09□□□□□ -1.75
HERVK_113P62684 RNU7-138P-201ENST00000459479 64 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 SUMO2P6-201ENST00000505273 288 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.09□□□□□ -1.75
HERVK_113P62684 AC092436.3-201ENST00000511788 257 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 RN7SKP209-201ENST00000516888 304 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 AC104576.1-201ENST00000524225 88 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.09□□□□□ -1.75
HERVK_113P62684 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.09□□□□□ -1.75
HERVK_113P62684 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HERVK_113P62684 BNIP3P16-201ENST00000589779 534 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 AC012493.2-201ENST00000595083 291 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 AC083806.3-201ENST00000614016 455 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 MIR7112-201ENST00000616126 65 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.09□□□□□ -1.75
HERVK_113P62684 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.09□□□□□ -1.75
HERVK_113P62684 AC073073.2-201ENST00000609827 2578 ntBASIC4.09□□□□□ -1.75
HERVK_113P62684 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.09□□□□□ -1.75
HERVK_113P62684 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
HERVK_113P62684 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.09□□□□□ -1.75
HERVK_113P62684 MTND5P16-201ENST00000460269 1703 ntBASIC4.09□□□□□ -1.76
HERVK_113P62684 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
HERVK_113P62684 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HERVK_113P62684 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HERVK_113P62684 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
HERVK_113P62684 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERVK_113P62684 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HERVK_113P62684 RNU6-1167P-201ENST00000363227 94 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 Y_RNA.148-201ENST00000363557 117 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERVK_113P62684 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HERVK_113P62684 RNU6-1181P-201ENST00000384191 106 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 RNU6-1106P-201ENST00000390845 107 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 RNU6-328P-201ENST00000390887 106 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 AL138878.1-201ENST00000405131 347 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 MTHFD2P2-201ENST00000407725 247 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 RNU6-293P-201ENST00000411259 106 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 EI24P1-201ENST00000416584 867 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.08□□□□□ -1.76
HERVK_113P62684 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.08□□□□□ -1.76
HERVK_113P62684 AL035666.1-201ENST00000446195 348 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 RPL7P5-201ENST00000471472 736 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 AC093663.1-201ENST00000497190 394 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 AC078918.1-201ENST00000498515 228 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.08□□□□□ -1.76
HERVK_113P62684 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.08□□□□□ -1.76
HERVK_113P62684 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.08□□□□□ -1.76
HERVK_113P62684 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.08□□□□□ -1.76
HERVK_113P62684 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.08□□□□□ -1.76
HERVK_113P62684 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.08□□□□□ -1.76
HERVK_113P62684 AC100830.2-201ENST00000581636 240 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 AC098826.3-201ENST00000603823 466 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 ELOCP5-201ENST00000604924 333 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 AC107294.1-201ENST00000609524 467 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 AL360181.4-201ENST00000621752 134 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 AP003355.3-201ENST00000623465 114 ntBASIC4.08□□□□□ -1.76
HERVK_113P62684 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.08□□□□□ -1.76
HERVK_113P62684 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERVK_113P62684 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HERVK_113P62684 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
HERVK_113P62684 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HERVK_113P62684 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
HERVK_113P62684 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.07□□□□□ -1.76
HERVK_113P62684 Y_RNA.2-201ENST00000362330 96 ntBASIC4.07□□□□□ -1.76
HERVK_113P62684 Y_RNA.5-201ENST00000362334 102 ntBASIC4.07□□□□□ -1.76
HERVK_113P62684 RNU6-1115P-201ENST00000362490 106 ntBASIC4.07□□□□□ -1.76
HERVK_113P62684 Y_RNA.144-201ENST00000363521 113 ntBASIC4.07□□□□□ -1.76
HERVK_113P62684 U3.19-201ENST00000390893 196 ntBASIC4.07□□□□□ -1.76
HERVK_113P62684 AL356057.3-201ENST00000402607 340 ntBASIC4.07□□□□□ -1.76
HERVK_113P62684 Z99755.1-201ENST00000414048 380 ntBASIC4.07□□□□□ -1.76
HERVK_113P62684 USP9YP30-201ENST00000430729 455 ntBASIC4.07□□□□□ -1.76
HERVK_113P62684 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.07□□□□□ -1.76
HERVK_113P62684 AC087588.1-201ENST00000462203 316 ntBASIC4.07□□□□□ -1.76
HERVK_113P62684 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.07□□□□□ -1.76
HERVK_113P62684 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.07□□□□□ -1.76
HERVK_113P62684 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.07□□□□□ -1.76
HERVK_113P62684 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.07□□□□□ -1.76
HERVK_113P62684 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.07□□□□□ -1.76
HERVK_113P62684 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.07□□□□□ -1.76
HERVK_113P62684 MED28P6-201ENST00000558776 231 ntBASIC4.07□□□□□ -1.76
HERVK_113P62684 AL161423.1-201ENST00000613700 262 ntBASIC4.07□□□□□ -1.76
HERVK_113P62684 AL732372.2-225ENST00000642124 456 ntBASIC4.07□□□□□ -1.76
HERVK_113P62684 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
HERVK_113P62684 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HERVK_113P62684 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HERVK_113P62684 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HERVK_113P62684 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.06□□□□□ -1.76
HERVK_113P62684 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms