Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNA5SP380-201ENST00000517190 98 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 AP004607.1-201ENST00000524456 203 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RHBDL3P58872 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.53□□□□□ -1.84
RHBDL3P58872 GTF3AP2-201ENST00000557014 266 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.53□□□□□ -1.84
RHBDL3P58872 MIR3941-201ENST00000582572 103 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 AC093783.1-201ENST00000612976 329 ntBASIC3.53□□□□□ -1.84
RHBDL3P58872 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.53□□□□□ -1.84
RHBDL3P58872 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.53□□□□□ -1.84
RHBDL3P58872 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.53□□□□□ -1.84
RHBDL3P58872 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.53□□□□□ -1.84
RHBDL3P58872 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
RHBDL3P58872 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.52□□□□□ -1.85
RHBDL3P58872 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDL3P58872 HSPA8P4-201ENST00000511877 1920 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
RHBDL3P58872 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.52□□□□□ -1.85
RHBDL3P58872 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.52□□□□□ -1.85
RHBDL3P58872 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDL3P58872 AC138393.1-203ENST00000327086 343 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 Y_RNA.481-201ENST00000384373 102 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 SNORA26.7-201ENST00000391288 122 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDL3P58872 AL353621.1-201ENST00000418219 243 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDL3P58872 MTCO3P30-201ENST00000426425 670 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDL3P58872 MTCO2P19-201ENST00000427513 598 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDL3P58872 AC022018.1-201ENST00000430685 241 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDL3P58872 AL451074.3-201ENST00000437709 472 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 RPS15AP9-201ENST00000439856 381 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.52□□□□□ -1.85
RHBDL3P58872 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDL3P58872 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.52□□□□□ -1.85
RHBDL3P58872 HIGD1AP2-201ENST00000446367 280 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AL360271.2-201ENST00000447710 161 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDL3P58872 AC012308.1-201ENST00000451232 178 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AL590639.1-201ENST00000456484 337 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 RPL22P13-201ENST00000493291 347 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AC107401.1-201ENST00000503426 685 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDL3P58872 RNA5SP367-201ENST00000516557 118 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDL3P58872 HSPE1P20-201ENST00000538133 289 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDL3P58872 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDL3P58872 AC006023.1-201ENST00000603944 259 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 RNU6-91P-201ENST00000607774 107 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 RMST_4.1-201ENST00000616886 107 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AL449363.1-201ENST00000617815 186 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.52□□□□□ -1.85
RHBDL3P58872 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDL3P58872 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RHBDL3P58872 AC096644.4-201ENST00000563417 2912 ntBASIC3.52□□□□□ -1.85
RHBDL3P58872 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
RHBDL3P58872 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RHBDL3P58872 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RHBDL3P58872 SNORD56.3-201ENST00000363507 71 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 Y_RNA.436-201ENST00000384097 102 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 RNU6-45P-201ENST00000384471 107 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.51□□□□□ -1.85
RHBDL3P58872 MORF4L1P6-201ENST00000418771 268 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 TIMM9P3-201ENST00000428659 274 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 AC092427.1-202ENST00000430569 476 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 USP9YP14-201ENST00000430663 563 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 AC009969.1-201ENST00000438726 172 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 SNRPFP3-201ENST00000457792 225 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RHBDL3P58872 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 AC074344.1-201ENST00000512823 224 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 SCGB1D5P-201ENST00000515134 247 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.51□□□□□ -1.85
RHBDL3P58872 OR1M4P-201ENST00000589199 287 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 AL391646.1-201ENST00000603860 190 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.51□□□□□ -1.85
RHBDL3P58872 HULC.1-201ENST00000612720 240 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.51□□□□□ -1.85
RHBDL3P58872 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.51□□□□□ -1.85
RHBDL3P58872 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RHBDL3P58872 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
RHBDL3P58872 AL359854.1-201ENST00000614203 1594 ntBASIC3.51□□□□□ -1.85
RHBDL3P58872 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDL3P58872 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
RHBDL3P58872 AL139276.1-201ENST00000311910 1001 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 U8.9-201ENST00000365667 134 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 RNU6-851P-201ENST00000384565 107 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RHBDL3P58872 RPL21P75-201ENST00000396599 483 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 RPL21P28-201ENST00000401418 483 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 AL592114.1-201ENST00000403842 483 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.5□□□□□ -1.85
RHBDL3P58872 AL365400.1-201ENST00000431854 640 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 MICF-203ENST00000432679 129 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 AC105272.1-201ENST00000438604 198 ntBASIC3.5□□□□□ -1.85
RHBDL3P58872 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDL3P58872 AC108938.1-201ENST00000451204 136 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms