Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RPPH1-2P-201ENST00000516688 293 ntBASIC2.56□□□□□ -2
PEX3P56589 RNU6-445P-201ENST00000516949 107 ntBASIC2.56□□□□□ -2
PEX3P56589 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
PEX3P56589 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PEX3P56589 AC084851.1-201ENST00000529105 249 ntBASIC2.56□□□□□ -2
PEX3P56589 AL391840.1-201ENST00000571144 367 ntBASIC2.56□□□□□ -2
PEX3P56589 MTND1P15-201ENST00000579262 949 ntBASIC2.56□□□□□ -2
PEX3P56589 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.56□□□□□ -2
PEX3P56589 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.56□□□□□ -2
PEX3P56589 RPL23AP78-201ENST00000599928 470 ntBASIC2.56□□□□□ -2
PEX3P56589 AL645944.1-201ENST00000603857 493 ntBASIC2.56□□□□□ -2
PEX3P56589 AC004805.2-201ENST00000605382 482 ntBASIC2.56□□□□□ -2
PEX3P56589 MIR98-201ENST00000606724 119 ntBASIC2.56□□□□□ -2
PEX3P56589 AC008498.1-201ENST00000613012 531 ntBASIC2.56□□□□□ -2
PEX3P56589 AC068880.5-201ENST00000624331 290 ntBASIC2.56□□□□□ -2
PEX3P56589 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
PEX3P56589 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
PEX3P56589 AC103710.2-202ENST00000641454 2853 ntBASIC2.55□□□□□ -2
PEX3P56589 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
PEX3P56589 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
PEX3P56589 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PEX3P56589 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PEX3P56589 RNU6-778P-201ENST00000363269 103 ntBASIC2.55□□□□□ -2
PEX3P56589 RNU6-1097P-201ENST00000363586 107 ntBASIC2.55□□□□□ -2
PEX3P56589 Y_RNA.159-201ENST00000363674 87 ntBASIC2.55□□□□□ -2
PEX3P56589 RNU6-61P-201ENST00000365528 109 ntBASIC2.55□□□□□ -2
PEX3P56589 OR5H15-201ENST00000383696 930 ntBASIC2.55□□□□□ -2
PEX3P56589 SNORA24.1-201ENST00000384401 135 ntBASIC2.55□□□□□ -2
PEX3P56589 AL445529.1-201ENST00000398713 389 ntBASIC2.55□□□□□ -2
PEX3P56589 MIR888-201ENST00000401186 77 ntBASIC2.55□□□□□ -2
PEX3P56589 RNA5SP508-201ENST00000411327 119 ntBASIC2.55□□□□□ -2
PEX3P56589 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.55□□□□□ -2
PEX3P56589 BTF3L4P3-201ENST00000418879 476 ntBASIC2.55□□□□□ -2
PEX3P56589 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.55□□□□□ -2
PEX3P56589 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.55□□□□□ -2
PEX3P56589 AL591704.1-201ENST00000432574 275 ntBASIC2.55□□□□□ -2
PEX3P56589 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.55□□□□□ -2
PEX3P56589 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.55□□□□□ -2
PEX3P56589 RPS29P12-201ENST00000460178 152 ntBASIC2.55□□□□□ -2
PEX3P56589 AC073901.1-201ENST00000462471 408 ntBASIC2.55□□□□□ -2
PEX3P56589 ZNF271P-202ENST00000465539 1970 ntBASIC2.55□□□□□ -2
PEX3P56589 AC108078.1-201ENST00000508073 725 ntBASIC2.55□□□□□ -2
PEX3P56589 RNU6-410P-201ENST00000517006 107 ntBASIC2.55□□□□□ -2
PEX3P56589 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.55□□□□□ -2
PEX3P56589 AC135279.1-201ENST00000543493 504 ntBASIC2.55□□□□□ -2
PEX3P56589 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.55□□□□□ -2
PEX3P56589 AC010546.1-201ENST00000569391 485 ntBASIC2.55□□□□□ -2
PEX3P56589 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.55□□□□□ -2
PEX3P56589 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.55□□□□□ -2
PEX3P56589 MIR4435-1-201ENST00000582552 80 ntBASIC2.55□□□□□ -2
PEX3P56589 MIR5007-201ENST00000583098 95 ntBASIC2.55□□□□□ -2
PEX3P56589 AC068790.2-201ENST00000602601 557 ntBASIC2.55□□□□□ -2
PEX3P56589 AL136363.2-201ENST00000604173 851 ntBASIC2.55□□□□□ -2
PEX3P56589 AC022893.3-201ENST00000607665 437 ntBASIC2.55□□□□□ -2
PEX3P56589 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.55□□□□□ -2
PEX3P56589 AC103591.3-201ENST00000608684 209 ntBASIC2.55□□□□□ -2
PEX3P56589 AC104073.3-201ENST00000610942 955 ntBASIC2.55□□□□□ -2
PEX3P56589 AL137847.3-201ENST00000611521 109 ntBASIC2.55□□□□□ -2
PEX3P56589 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
PEX3P56589 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.55□□□□□ -2
PEX3P56589 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.54□□□□□ -2
PEX3P56589 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.54□□□□□ -2
PEX3P56589 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PEX3P56589 RNA5SP393-201ENST00000363423 117 ntBASIC2.54□□□□□ -2
PEX3P56589 RNU6-799P-201ENST00000363567 107 ntBASIC2.54□□□□□ -2
PEX3P56589 RNY1P12-201ENST00000364251 105 ntBASIC2.54□□□□□ -2
PEX3P56589 RNU6-190P-201ENST00000384154 102 ntBASIC2.54□□□□□ -2
PEX3P56589 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.54□□□□□ -2
PEX3P56589 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.54□□□□□ -2
PEX3P56589 AL589823.1-201ENST00000429577 183 ntBASIC2.54□□□□□ -2
PEX3P56589 AL592045.1-201ENST00000429867 352 ntBASIC2.54□□□□□ -2
PEX3P56589 DLGAP5P1-201ENST00000430307 464 ntBASIC2.54□□□□□ -2
PEX3P56589 AL591212.2-201ENST00000433923 257 ntBASIC2.54□□□□□ -2
PEX3P56589 CR769767.1-201ENST00000436337 346 ntBASIC2.54□□□□□ -2
PEX3P56589 AC018634.1-201ENST00000437554 401 ntBASIC2.54□□□□□ -2
PEX3P56589 AC079781.2-201ENST00000446424 169 ntBASIC2.54□□□□□ -2
PEX3P56589 MTCO2P7-201ENST00000446518 666 ntBASIC2.54□□□□□ -2
PEX3P56589 RNU6-953P-201ENST00000459154 107 ntBASIC2.54□□□□□ -2
PEX3P56589 AC109927.2-201ENST00000506416 303 ntBASIC2.54□□□□□ -2
PEX3P56589 RNU6-914P-201ENST00000516749 109 ntBASIC2.54□□□□□ -2
PEX3P56589 RNU6-677P-201ENST00000516914 101 ntBASIC2.54□□□□□ -2
PEX3P56589 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.54□□□□□ -2
PEX3P56589 AC105137.2-201ENST00000569073 466 ntBASIC2.54□□□□□ -2
PEX3P56589 AC007336.1-201ENST00000576365 3828 ntBASIC2.54□□□□□ -2
PEX3P56589 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.54□□□□□ -2
PEX3P56589 SNORD53-201ENST00000579969 78 ntBASIC2.54□□□□□ -2
PEX3P56589 AC091805.2-201ENST00000603848 235 ntBASIC2.54□□□□□ -2
PEX3P56589 AL391646.1-201ENST00000603860 190 ntBASIC2.54□□□□□ -2
PEX3P56589 AL161734.1-201ENST00000609720 557 ntBASIC2.54□□□□□ -2
PEX3P56589 AC130324.3-201ENST00000614165 542 ntBASIC2.54□□□□□ -2
PEX3P56589 AL590808.1-201ENST00000618696 141 ntBASIC2.54□□□□□ -2
PEX3P56589 AC068137.4-201ENST00000638485 296 ntBASIC2.54□□□□□ -2
PEX3P56589 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.54□□□□□ -2
PEX3P56589 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
PEX3P56589 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.53□□□□□ -2
PEX3P56589 RNU6-623P-201ENST00000363143 105 ntBASIC2.53□□□□□ -2
PEX3P56589 RNU6-288P-201ENST00000363690 104 ntBASIC2.53□□□□□ -2
PEX3P56589 MIR1-2-201ENST00000384961 85 ntBASIC2.53□□□□□ -2
PEX3P56589 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.53□□□□□ -2
PEX3P56589 MTCO2P19-201ENST00000427513 598 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms